RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 DSTYKQ6XUX3 929 aa13.05□□□□□ -0.32
CCDC78-213ENST00000482878 PPP1R21Q6ZMI0 780 aa13.05□□□□□ -0.32
CCDC78-213ENST00000482878 SYTL5Q8TDW5 730 aaPredicted RBP13.05□□□□□ -0.32
CCDC78-213ENST00000482878 INPP5DQ92835 1189 aa13.05□□□□□ -0.32
CCDC78-213ENST00000482878 GRAMD1AQ96CP6 724 aa13.05□□□□□ -0.32
CCDC78-213ENST00000482878 HAUS1Q96CS2 278 aa13.05□□□□□ -0.32
CCDC78-213ENST00000482878 C11orf70Q9BRQ4 267 aa13.05□□□□□ -0.32
CCDC78-213ENST00000482878 TBC1D22BQ9NU19 505 aa13.05□□□□□ -0.32
CCDC78-213ENST00000482878 KLHL11Q9NVR0 708 aa13.05□□□□□ -0.32
CCDC78-213ENST00000482878 USTQ9Y2C2 406 aa13.05□□□□□ -0.32
CCDC78-213ENST00000482878 PCDHB2Q9Y5E7 798 aa13.05□□□□□ -0.32
CCDC78-213ENST00000482878 COL11A2P13942 1736 aaPredicted RBP13.04□□□□□ -0.32
CCDC78-213ENST00000482878 SPDYE2BA6NHP3 402 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 SPDYE6P0CI01 402 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 GTF2H1P32780 548 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 PTP4A2Q12974 167 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 MPP3Q13368 585 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 CMPK2Q5EBM0 449 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 SPOPLQ6IQ16 392 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 GSTA5Q7RTV2 222 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 RELL1Q8IUW5 271 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 IFT43Q96FT9 208 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 CCDC77Q9BR77 488 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 FHDC1Q9C0D6 1143 aaPredicted RBP13.04□□□□□ -0.32
CCDC78-213ENST00000482878 ACTL7BQ9Y614 415 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 CYP1A1P04798 512 aaPredicted RBP13.04□□□□□ -0.32
CCDC78-213ENST00000482878 LYNP07948 512 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 SPATA31D3P0C874 917 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 ZSCAN5DPP0CG00 497 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 WNT7BP56706 349 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 SLC34A1Q06495 639 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 ATP13A4Q4VNC1 1196 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 SPATA31D4Q6ZUB0 917 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 RHOT1Q8IXI2 618 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 ST13P4Q8IZP2 240 aaPredicted RBP13.04□□□□□ -0.32
CCDC78-213ENST00000482878 ANKRD35Q8N283 1001 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 MRRFQ96E11 262 aaKnown RBP13.04□□□□□ -0.32
CCDC78-213ENST00000482878 SLCO1B3Q9NPD5 702 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 C1orf112Q9NSG2 853 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.04□□□□□ -0.32
CCDC78-213ENST00000482878 HNRNPDLO14979 420 aaKnown RBP13.04□□□□□ -0.32
CCDC78-213ENST00000482878 ASMTLO95671 621 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 ZBTB16Q05516 673 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 MAMLD1Q13495 774 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 ACVR2BQ13705 512 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 FASTKD3Q14CZ7 662 aaKnown RBP13.04□□□□□ -0.32
CCDC78-213ENST00000482878 PABPC1LQ4VXU2 614 aaKnown RBP13.04□□□□□ -0.32
CCDC78-213ENST00000482878 ENOSF1Q7L5Y1 443 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 GPD1LQ8N335 351 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 ZCCHC9Q8N567 271 aaKnown RBP13.04□□□□□ -0.32
CCDC78-213ENST00000482878 ARL10Q8N8L6 244 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 FAM151AQ8WW52 585 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 MPP4Q96JB8 637 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 CLMNQ96JQ2 1002 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 ZNF70Q9UC06 446 aaPredicted RBP13.04□□□□□ -0.32
CCDC78-213ENST00000482878 PHTF1Q9UMS5 762 aa13.04□□□□□ -0.32
CCDC78-213ENST00000482878 CNTNAP1P78357 1384 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 EXOC1LA0A1B0GW35 172 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 PSTPIP1O43586 416 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 KRT10P13645 584 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 NEK3P51956 506 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 LIN52Q52LA3 116 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 C15orf39Q6ZRI6 1047 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 TRABD2AQ86V40 505 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 RIBC1Q8N443 379 aaPredicted RBP13.03□□□□□ -0.32
CCDC78-213ENST00000482878 BBOF1Q8ND07 529 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 NRG4Q8WWG1 115 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 SMC6Q96SB8 1091 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 ZNF184Q99676 751 aaPredicted RBP13.03□□□□□ -0.32
CCDC78-213ENST00000482878 ADAM33Q9BZ11 813 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 SAYSD1Q9NPB0 183 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 ANKEF1Q9NU02 776 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 DCTN4Q9UJW0 460 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 GRID1Q9ULK0 1009 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 ZNF711Q9Y462 761 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 A6NJR5 290 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 PI4K2BG5E9Z4 385 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 GYG2O15488 501 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 ETS1P14921 441 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 TCF4P15884 667 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 PTPN4P29074 926 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 C4orf50Q6ZRC1 276 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 EEPD1Q7L9B9 569 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 SPATA24Q86W54 205 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 KATNAL2Q8IYT4 538 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 FLAD1Q8NFF5 587 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 TRIM11Q96F44 468 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 TUBGCP5Q96RT8 1024 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 CFAP69A5D8W1 941 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 WDR64B1ANS9 1081 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 POC1B-GALNT4F8VUJ3 575 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 INHBCP55103 352 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 RPS6P62753 249 aaKnown RBP13.03□□□□□ -0.32
CCDC78-213ENST00000482878 CCDC15Q0P6D6 951 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 TTLL12Q14166 644 aaPredicted RBP13.03□□□□□ -0.32
CCDC78-213ENST00000482878 PGM5Q15124 567 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 KAZNQ674X7 775 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 IZUMO2Q6UXV1 221 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 CAPN12Q6ZSI9 719 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms