RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 SLC16A3O15427 465 aaKnown RBP10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 TBC1D4O60343 1298 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 STX10O60499 249 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 SOAT2O75908 522 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 ABLIM3O94929 683 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 VNN1O95497 513 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 MBD3O95983 291 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 C4BPAP04003 597 aaKnown RBP10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 HNRNPA1P09651 372 aaKnown RBP eCLIP10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 P4HA1P13674 534 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 ATF2P15336 505 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 PCSK1P29120 753 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 ATICP31939 592 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 RAP1GAPP47736 663 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 ALDH1A3P47895 512 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 LHX1P48742 406 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 MXI1P50539 228 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 PSMC1P62191 440 aaKnown RBP10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 PPP3CAQ08209 521 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 DUSP4Q13115 394 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 GPR17Q13304 367 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 TAF12Q16514 161 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 SOWAHAQ2M3V2 549 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 UVSSAQ2YD98 709 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 SPOPLQ6IQ16 392 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 C15orf39Q6ZRI6 1047 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 SV2AQ7L0J3 742 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 OSTM1Q86WC4 334 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 CMASQ8NFW8 434 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 CXorf38Q8TB03 319 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 ZNF707Q96C28 371 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 ACSF2Q96CM8 615 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 SYT15Q9BQS2 421 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 CORO1BQ9BR76 489 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 MKNK1Q9BUB5 465 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 SRRTQ9BXP5 876 aaKnown RBP10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 ZCWPW1Q9H0M4 648 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 SMYD3Q9H7B4 428 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 HCFC1R1Q9NWW0 138 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 GDAP2Q9NXN4 497 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 ARMCX3Q9UH62 379 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 YIPF1Q9Y548 306 aa10.7□□□□□ -0.7
SPTLC1-206ENST00000482632 DOCK8Q8NF50 2099 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 A8MXQ7 604 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 C2CD4DB7Z1M9 353 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 IKBKBO14920 756 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 FGFR1OPO95684 399 aaKnown RBP10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 C1RP00736 705 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 FSHRP23945 695 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 EPHB3P54753 998 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 CDH8P55286 799 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 NLRP12P59046 1061 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 NOP14P78316 857 aaKnown RBP10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 SGSM1Q2NKQ1 1148 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 ZACNQ401N2 412 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 PABPC1LQ4VXU2 614 aaKnown RBP10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 C1orf220Q5T0J3 134 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 KRT39Q6A163 491 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 IQCEQ6IPM2 695 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 TTI2Q6NXR4 508 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 ADGRD1Q6QNK2 874 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 ALYREFQ86V81 257 aaKnown RBP10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 SPATA2LQ8IUW3 424 aaPredicted RBP10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 TCEAL8Q8IYN2 117 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 TTC9BQ8N6N2 239 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 TAS1R2Q8TE23 839 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 TMEM174Q8WUU8 243 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 ING5Q8WYH8 240 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 ZNF512Q96ME7 567 aaPredicted RBP10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 CEP63Q96MT8 703 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 DUSP9Q99956 384 aaKnown RBP10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 RTP3Q9BQQ7 232 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 MRPL45Q9BRJ2 306 aaKnown RBP10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 TMEM8AQ9HCN3 771 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 DACH1Q9UI36 760 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 PCDHB5Q9Y5E4 795 aa10.69□□□□□ -0.7
SPTLC1-206ENST00000482632 PTPRDP23468 1912 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 ATP2C2O75185 946 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 RHOP08100 348 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 MYL4P12829 197 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 PTPN2P17706 415 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 WARSP23381 471 aaKnown RBP10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 LMO2P25791 158 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 HOXA9P31269 272 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 GNL1P36915 607 aaPredicted RBP10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 CLDN10P78369 228 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 CYP27A1Q02318 531 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 PLD1Q13393 1074 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 VEPH1Q14D04 833 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 CCDC142Q17RM4 750 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 DPCR1Q3MIW9 517 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 MDH1BQ5I0G3 518 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 WDR44Q5JSH3 913 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 INTS6LQ5JSJ4 861 aaKnown RBP10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 CCDC183Q5T5S1 534 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 SASS6Q6UVJ0 657 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 CYP26C1Q6V0L0 522 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 DPH6Q7L8W6 267 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 OTOP3Q7RTS5 596 aa10.68□□□□□ -0.7
SPTLC1-206ENST00000482632 FILIP1Q7Z7B0 1213 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms