RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 PPEF2O14830 753 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 ZC3H11AO75152 810 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDK11A-216ENST00000479362 LRRN2O75325 713 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 ASS1P00966 412 aaKnown RBP11.13□□□□□ -0.63
CDK11A-216ENST00000479362 SP9P0CG40 484 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 SRGAP2BP0DMP2 458 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 HOXB8P17481 243 aaPredicted RBP11.13□□□□□ -0.63
CDK11A-216ENST00000479362 TRIM21P19474 475 aaKnown RBP11.13□□□□□ -0.63
CDK11A-216ENST00000479362 ATICP31939 592 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 RPL9P32969 192 aaKnown RBP11.13□□□□□ -0.63
CDK11A-216ENST00000479362 PNPLA4P41247 253 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 MYO1EQ12965 1108 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 SGSM1Q2NKQ1 1148 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 SPECC1LQ69YQ0 1117 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 TMC6Q7Z403 805 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 ZNF280BQ86YH2 543 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 DRC7Q8IY82 874 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 LRRC52Q8N7C0 313 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 LMO3Q8TAP4 145 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 TAF4BQ92750 862 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 NECTIN4Q96NY8 510 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 RTKNQ9BST9 563 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 SIX2Q9NPC8 291 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 PLCB1Q9NQ66 1216 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.13□□□□□ -0.632e-15■■■■■ 372.6
CDK11A-216ENST00000479362 CACNG4Q9UBN1 327 aa11.13□□□□□ -0.63
CDK11A-216ENST00000479362 CNOT1A5YKK6 2376 aaKnown RBP11.12□□□□□ -0.63
CDK11A-216ENST00000479362 PIRO00625 290 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 B4GALT3O60512 393 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 DDHD2O94830 711 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 STAU1O95793 577 aaKnown RBP11.12□□□□□ -0.63
CDK11A-216ENST00000479362 CST3P01034 146 aaPredicted RBP11.12□□□□□ -0.63
CDK11A-216ENST00000479362 RFX1P22670 979 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 TAF6P49848 677 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 CLCNKBP51801 687 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 APBA1Q02410 837 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 UBE3AQ05086 875 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 LRMPQ12912 555 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 TRIM14Q14142 442 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 UPP1Q16831 310 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 SV2CQ496J9 727 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 ZNF667Q5HYK9 610 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 KLHDC7AQ5VTJ3 777 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 SCARA3Q6AZY7 606 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 SPOPLQ6IQ16 392 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 COLGALT2Q8IYK4 626 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 TDRD5Q8NAT2 981 aaKnown RBP11.12□□□□□ -0.63
CDK11A-216ENST00000479362 KCNV2Q8TDN2 545 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 ELMO3Q96BJ8 720 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 IQCDQ96DY2 449 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 HPDLQ96IR7 371 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 NIF3L1Q9GZT8 377 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 XYLT2Q9H1B5 865 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 GANQ9H2C0 597 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 ADAM7Q9H2U9 754 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 NRDE2Q9H7Z3 1164 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 HCSTQ9UBK5 93 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 APEX2Q9UBZ4 518 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 DNAJB4Q9UDY4 337 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 DAAM1Q9Y4D1 1078 aa11.12□□□□□ -0.63
CDK11A-216ENST00000479362 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.12□□□□□ -0.631e-6■■■■□ 24.6
CDK11A-216ENST00000479362 GOLGA6L6A8MZA4 724 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 PRR5-ARHGAP8B1AHC4 643 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 EPHB6O15197 1021 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 TPM1P09493 284 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 WEE2P0C1S8 567 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 P4HA1P13674 534 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 UCHL3P15374 230 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 TBXAS1P24557 533 aaPredicted RBP11.11□□□□□ -0.63
CDK11A-216ENST00000479362 OR1G1P47890 313 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 TNNC1P63316 161 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 ARHGAP8P85298 464 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 LMNB2Q03252 620 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 WDR72Q3MJ13 1102 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 FIGNQ5HY92 759 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 PPM1JQ5JR12 505 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 VARS2Q5ST30 1063 aaKnown RBP11.11□□□□□ -0.63
CDK11A-216ENST00000479362 SPOUT1Q5T280 376 aaKnown RBP11.11□□□□□ -0.63
CDK11A-216ENST00000479362 DPY19L2P1Q6NXN4 242 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 SCARA5Q6ZMJ2 495 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 PPFIBP1Q86W92 1011 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 ARHGEF19Q8IW93 802 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 PPM1KQ8N3J5 372 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 RABGGTAQ92696 567 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 FAM81BQ96LP2 452 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 PAAF1Q9BRP4 392 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 TMEM175Q9BSA9 504 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 NUP58Q9BVL2 599 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 VRTNQ9H8Y1 702 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 APOBEC3GQ9HC16 384 aaKnown RBP11.11□□□□□ -0.63
CDK11A-216ENST00000479362 CEP72Q9P209 647 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 NXF1Q9UBU9 619 aaKnown RBP11.11□□□□□ -0.63
CDK11A-216ENST00000479362 DUSP12Q9UNI6 340 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 PRG3Q9Y2Y8 225 aaPredicted RBP11.11□□□□□ -0.63
CDK11A-216ENST00000479362 NUB1Q9Y5A7 615 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 FHOD1Q9Y613 1164 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 ITPR1Q14643 2758 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 PATJQ8NI35 1801 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 IGF2RP11717 2491 aa11.11□□□□□ -0.63
CDK11A-216ENST00000479362 DMXL2Q8TDJ6 3036 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms