RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 POTEBQ6S5H4 581 aa22.26■■□□□ 1.15
SDF4-206ENST00000478938 ZNF564Q8TBZ8 553 aaPredicted RBP22.26■■□□□ 1.15
SDF4-206ENST00000478938 DCUN1D1Q96GG9 259 aa22.26■■□□□ 1.15
SDF4-206ENST00000478938 NUP85Q9BW27 656 aa22.26■■□□□ 1.15
SDF4-206ENST00000478938 VAT1LQ9HCJ6 419 aa22.26■■□□□ 1.15
SDF4-206ENST00000478938 UTP6Q9NYH9 597 aaKnown RBP22.26■■□□□ 1.15
SDF4-206ENST00000478938 DENRO43583 198 aaKnown RBP22.26■■□□□ 1.15
SDF4-206ENST00000478938 TNFAIP8O95379 198 aa22.26■■□□□ 1.15
SDF4-206ENST00000478938 TTC17Q96AE7 1141 aa22.26■■□□□ 1.15
SDF4-206ENST00000478938 TMIGD2Q96BF3 282 aa22.26■■□□□ 1.15
SDF4-206ENST00000478938 ERLEC1Q96DZ1 483 aa22.26■■□□□ 1.15
SDF4-206ENST00000478938 NEURL2Q9BR09 285 aa22.26■■□□□ 1.15
SDF4-206ENST00000478938 HEMGNQ9BXL5 484 aa22.26■■□□□ 1.15
SDF4-206ENST00000478938 PLK2Q9NYY3 685 aa22.26■■□□□ 1.15
SDF4-206ENST00000478938 C10orf71Q711Q0 1435 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 GTPBP10A4D1E9 387 aaKnown RBP22.25■■□□□ 1.15
SDF4-206ENST00000478938 USP17L3A6NCW0 530 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 USP17L4A6NCW7 530 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 PRR5-ARHGAP8B1AHC4 643 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 FOXD2O60548 495 aaPredicted RBP22.25■■□□□ 1.15
SDF4-206ENST00000478938 TGDSO95455 350 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 FUCA1P04066 466 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 SRGAP2CP0DJJ0 459 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 SRGAP2BP0DMP2 458 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 ALDH18A1P54886 795 aaKnown RBP22.25■■□□□ 1.15
SDF4-206ENST00000478938 ARHGAP8P85298 464 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 ARHGAP4P98171 946 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 KCNA1Q09470 495 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 RALGPS1Q5JS13 557 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 USP17L1Q7RTZ2 530 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 OSBPL6Q9BZF3 934 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 BCAS3Q9H6U6 928 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 ZNF696Q9H7X3 374 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 C17orf75Q9HAS0 396 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 THEGQ9P2T0 379 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 ASTN1O14525 1302 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 MYPNQ86TC9 1320 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 ITM2AO43736 263 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 CALUO43852 315 aaPredicted RBP22.25■■□□□ 1.15
SDF4-206ENST00000478938 BANF1O75531 89 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 CRTAMO95727 393 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 CD300CQ08708 224 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 NLRP10Q86W26 655 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 SCAIQ8N9R8 606 aa22.25■■□□□ 1.15
SDF4-206ENST00000478938 PIK3CDO00329 1044 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 TRPA1O75762 1119 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 CPOXP36551 454 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 BCAP31P51572 246 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 NR1H2P55055 460 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 CYP4A11Q02928 519 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 UBAP2LQ14157 1087 aaKnown RBP22.24■■□□□ 1.15
SDF4-206ENST00000478938 CBWD6Q4V339 395 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 CBWD3Q5JTY5 395 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 CBWD5Q5RIA9 395 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 SYCP2LQ5T4T6 812 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 RNF169Q8NCN4 708 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 ZNF384Q8TF68 577 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 INTS2Q9H0H0 1204 aaKnown RBP22.24■■□□□ 1.15
SDF4-206ENST00000478938 TRNAU1APQ9NX07 287 aaKnown RBP22.24■■□□□ 1.15
SDF4-206ENST00000478938 UVRAGQ9P2Y5 699 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 HOXD11P31277 338 aaPredicted RBP22.24■■□□□ 1.15
SDF4-206ENST00000478938 CIITAP33076 1130 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 NOP9Q86U38 636 aaKnown RBP22.24■■□□□ 1.15
SDF4-206ENST00000478938 AHI1Q8N157 1196 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 EFCAB3Q8N7B9 438 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 CLIP3Q96DZ5 547 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 CSRNP1Q96S65 589 aa22.24■■□□□ 1.15
SDF4-206ENST00000478938 RSPH10B2B2RC85 870 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 RSPH10BP0C881 870 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 OCM2P0CE71 109 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 OCMP0CE72 109 aaPredicted RBP22.23■■□□□ 1.15
SDF4-206ENST00000478938 MAN1A1P33908 653 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 ZNF423Q2M1K9 1284 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 KIF6Q6ZMV9 814 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 ANO5Q75V66 913 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 ANKS1BQ7Z6G8 1248 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 LZTR1Q8N653 840 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 PYROXD1Q8WU10 500 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 PCDHB18PQ96TA0 734 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 AP4B1Q9Y6B7 739 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 THRAP10827 490 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 RFC4P35249 363 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 PHKA2P46019 1235 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 ALDH1A3P47895 512 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 FMO5P49326 533 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 EIF2B2P49770 351 aaKnown RBP22.23■■□□□ 1.15
SDF4-206ENST00000478938 CNGA3Q16281 694 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 BANPQ8N9N5 519 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 MORC4Q8TE76 937 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 DCP1AQ9NPI6 582 aaPredicted RBP22.23■■□□□ 1.15
SDF4-206ENST00000478938 SSX2IPQ9Y2D8 614 aa22.23■■□□□ 1.15
SDF4-206ENST00000478938 POLR2MP0CAP2 368 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 TRIM49P0CI25 452 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 TRIM49CP0CI26 452 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 IGBP1P78318 339 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 PDE1CQ14123 709 aaPredicted RBP22.22■■□□□ 1.15
SDF4-206ENST00000478938 DHRS4L2Q6PKH6 230 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 LPCAT2Q7L5N7 544 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 SEPT12Q8IYM1 358 aa22.22■■□□□ 1.15
SDF4-206ENST00000478938 CCDC89Q8N998 374 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms