RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 FZD5Q13467 585 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 SART3Q15020 963 aaKnown RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 PCBP1Q15365 356 aaKnown RBP eCLIP3.83□□□□□ -1.82e-7■■■■■ 35.4
FNDC3B-209ENST00000478016 SMAD2Q15796 467 aaKnown RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 INAQ16352 499 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 MEA1Q16626 185 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 CCDC14Q49A88 953 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 SLC45A4Q5BKX6 768 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 FAM26FQ5R3K3 315 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 CATSPEREQ5SY80 951 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 PHF19Q5T6S3 580 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 HHATQ5VTY9 493 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 METTL11BQ5VVY1 283 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 ITPRIPL1Q6GPH6 555 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 MFSD6Q6ZSS7 791 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 PLEKHM3Q6ZWE6 761 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 ENOSF1Q7L5Y1 443 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 EPM2AIP1Q7L775 607 aaPredicted RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 CHST15Q7LFX5 561 aaPredicted RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 ATG9AQ7Z3C6 839 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 DGLUCYQ7Z3D6 616 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 MRPL10Q7Z7H8 261 aaKnown RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 IQCA1Q86XH1 822 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 VSIG1Q86XK7 387 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 RPAP2Q8IXW5 612 aaPredicted RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 TMEM57Q8N5G2 664 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 HIPK4Q8NE63 616 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 ZMIZ2Q8NF64 920 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 OR2W6PQ8NHA6 318 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 NSUN6Q8TEA1 469 aaKnown RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 LEO1Q8WVC0 666 aaPredicted RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 CDCA5Q96FF9 252 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 RADILQ96JH8 1075 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 SGCZQ96LD1 299 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 SAMD11Q96NU1 681 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 SEC62Q99442 399 aaKnown RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 SPATA25Q9BR10 227 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 CHCHD6Q9BRQ6 235 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 CRACR2AQ9BSW2 395 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 DNAI2Q9GZS0 605 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 NRDE2Q9H7Z3 1164 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 L2HGDHQ9H9P8 463 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 SPON1Q9HCB6 807 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 INCENPQ9NQS7 918 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 ACSS2Q9NR19 701 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 INTS10Q9NVR2 710 aaKnown RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 OXSMQ9NWU1 459 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 RRN3Q9NYV6 651 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 ZNF624Q9P2J8 865 aaPredicted RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 SH3BGRL2Q9UJC5 107 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 ASB1Q9Y576 335 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 MROH5Q6ZUA9 1318 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 ZCCHC11Q5TAX3 1644 aaKnown RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 MAP3K4Q9Y6R4 1608 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 DISP1Q96F81 1524 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 KANK1Q14678 1352 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 NINLQ9Y2I6 1382 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 TNKSO95271 1327 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 MAP3K19Q56UN5 1328 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 hCG_1642624A0A1W2PR95 340 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 ZNF891A8MT65 544 aaPredicted RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 DVL2O14641 736 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 PLSCR1O15162 318 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 DIAPH2O60879 1101 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 GOSR1O95249 250 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 TRIM16O95361 564 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 ATP2A2P16615 1042 aaKnown RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 TRIM21P19474 475 aaKnown RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 LPOP22079 712 aaPredicted RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 CHMLP26374 656 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 ATP5DP30049 168 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 MC4RP32245 332 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 ELF1P32519 619 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 SOX6P35712 828 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 TCF7P36402 384 aaPredicted RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 HNF4AP41235 474 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 RRP1P56182 461 aaKnown RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 CCNA1P78396 465 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 IL1RL1Q01638 556 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 OCRLQ01968 901 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 CDC16Q13042 620 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 GTF2H3Q13889 308 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 IDI1Q13907 227 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 DPYSQ14117 519 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 PTPN21Q16825 1174 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 SKOR2Q2VWA4 1001 aaPredicted RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 CEP55Q53EZ4 464 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 ZNF362Q5T0B9 420 aaPredicted RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 EMC10Q5UCC4 262 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 CREB3L3Q68CJ9 461 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 ALKBH5Q6P6C2 394 aaKnown RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 TRMT10BQ6PF06 316 aaKnown RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 OLFML1Q6UWY5 402 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 DPP8Q6V1X1 898 aaPredicted RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 IKBIPQ70UQ0 350 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 NUP54Q7Z3B4 507 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 GPR155Q7Z3F1 870 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 ZNF761Q86XN6 746 aaPredicted RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 NME9Q86XW9 330 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 NXPE1Q8N323 547 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms