RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 MRPS5P82675 430 aaKnown RBP31.53■■■□□ 2.64
HOXB3-208ENST00000476342 IQCB1Q15051 598 aa31.53■■■□□ 2.64
HOXB3-208ENST00000476342 FAM171BQ6P995 826 aa31.53■■■□□ 2.64
HOXB3-208ENST00000476342 CYP26C1Q6V0L0 522 aa31.53■■■□□ 2.64
HOXB3-208ENST00000476342 C4orf50Q6ZRC1 276 aa31.53■■■□□ 2.64
HOXB3-208ENST00000476342 PPM1KQ8N3J5 372 aa31.53■■■□□ 2.64
HOXB3-208ENST00000476342 ATAD1Q8NBU5 361 aa31.53■■■□□ 2.64
HOXB3-208ENST00000476342 CRACR2AQ9BSW2 395 aa31.53■■■□□ 2.64
HOXB3-208ENST00000476342 HSD3B7Q9H2F3 369 aa31.53■■■□□ 2.64
HOXB3-208ENST00000476342 ABI2Q9NYB9 513 aaPredicted RBP31.53■■■□□ 2.64
HOXB3-208ENST00000476342 NME7Q9Y5B8 376 aa31.53■■■□□ 2.64
HOXB3-208ENST00000476342 INSL5Q9Y5Q6 135 aa31.53■■■□□ 2.64
HOXB3-208ENST00000476342 VNN2O95498 520 aa31.52■■■□□ 2.64
HOXB3-208ENST00000476342 LRG1P02750 347 aa31.52■■■□□ 2.64
HOXB3-208ENST00000476342 NDST1P52848 882 aa31.52■■■□□ 2.64
HOXB3-208ENST00000476342 DUSP4Q13115 394 aa31.52■■■□□ 2.64
HOXB3-208ENST00000476342 LRSAM1Q6UWE0 723 aa31.52■■■□□ 2.64
HOXB3-208ENST00000476342 B3GALNT2Q8NCR0 500 aa31.52■■■□□ 2.64
HOXB3-208ENST00000476342 GADD45GIP1Q8TAE8 222 aaPredicted RBP31.52■■■□□ 2.64
HOXB3-208ENST00000476342 PRKD2Q9BZL6 878 aa31.52■■■□□ 2.64
HOXB3-208ENST00000476342 CBX8Q9HC52 389 aa31.52■■■□□ 2.64
HOXB3-208ENST00000476342 CRTAC1Q9NQ79 661 aa31.52■■■□□ 2.64
HOXB3-208ENST00000476342 TMLHEQ9NVH6 421 aa31.52■■■□□ 2.64
HOXB3-208ENST00000476342 LIMA1Q9UHB6 759 aaKnown RBP31.52■■■□□ 2.64
HOXB3-208ENST00000476342 MYBPHLA2RUH7 354 aa31.51■■■□□ 2.64
HOXB3-208ENST00000476342 MBTPS2O43462 519 aa31.51■■■□□ 2.64
HOXB3-208ENST00000476342 ATP2C2O75185 946 aa31.51■■■□□ 2.64
HOXB3-208ENST00000476342 XYLBO75191 536 aa31.51■■■□□ 2.64
HOXB3-208ENST00000476342 PTPN1P18031 435 aaKnown RBP31.51■■■□□ 2.64
HOXB3-208ENST00000476342 TUFMP49411 452 aaKnown RBP31.51■■■□□ 2.64
HOXB3-208ENST00000476342 TPM4P67936 248 aa31.51■■■□□ 2.64
HOXB3-208ENST00000476342 TRIM65Q6PJ69 517 aa31.51■■■□□ 2.64
HOXB3-208ENST00000476342 SPATA2LQ8IUW3 424 aaPredicted RBP31.51■■■□□ 2.64
HOXB3-208ENST00000476342 MYCBPAPQ8TBZ2 947 aa31.51■■■□□ 2.64
HOXB3-208ENST00000476342 FUBP3Q96I24 572 aaKnown RBP eCLIP31.51■■■□□ 2.64
HOXB3-208ENST00000476342 RIPOR3Q96MK2 946 aa31.51■■■□□ 2.64
HOXB3-208ENST00000476342 ARID3AQ99856 593 aa31.51■■■□□ 2.64
HOXB3-208ENST00000476342 RHOBTB2Q9BYZ6 727 aa31.51■■■□□ 2.64
HOXB3-208ENST00000476342 VPS16Q9H269 839 aa31.51■■■□□ 2.64
HOXB3-208ENST00000476342 DPEP3Q9H4B8 488 aa31.51■■■□□ 2.64
HOXB3-208ENST00000476342 CISHQ9NSE2 258 aa31.51■■■□□ 2.64
HOXB3-208ENST00000476342 CILPO75339 1184 aa31.5■■■□□ 2.63
HOXB3-208ENST00000476342 PAPLNO95428 1278 aa31.5■■■□□ 2.63
HOXB3-208ENST00000476342 PLD1Q13393 1074 aa31.5■■■□□ 2.63
HOXB3-208ENST00000476342 MDH1BQ5I0G3 518 aa31.5■■■□□ 2.63
HOXB3-208ENST00000476342 PTCRAQ6ISU1 281 aaPredicted RBP31.5■■■□□ 2.63
HOXB3-208ENST00000476342 GPR149Q86SP6 731 aa31.5■■■□□ 2.63
HOXB3-208ENST00000476342 FAM200AQ8TCP9 573 aa31.5■■■□□ 2.63
HOXB3-208ENST00000476342 NT5C1AQ9BXI3 368 aa31.5■■■□□ 2.63
HOXB3-208ENST00000476342 TSPY26PQ9H489 355 aa31.5■■■□□ 2.63
HOXB3-208ENST00000476342 ABCB6Q9NP58 842 aa31.5■■■□□ 2.63
HOXB3-208ENST00000476342 USP15Q9Y4E8 981 aaPredicted RBP31.5■■■□□ 2.63
HOXB3-208ENST00000476342 YIPF1Q9Y548 306 aa31.5■■■□□ 2.63
HOXB3-208ENST00000476342 C2orf16Q68DN1 1984 aa31.5■■■□□ 2.63
HOXB3-208ENST00000476342 POU2F2P09086 479 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 MTHFRP42898 656 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 COPB1P53618 953 aaKnown RBP31.49■■■□□ 2.63
HOXB3-208ENST00000476342 GCNT1Q02742 428 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 MGAT5BQ3V5L5 792 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 CFAP221Q4G0U5 840 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 ATAT1Q5SQI0 421 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 PHF6Q8IWS0 365 aaKnown RBP eCLIP31.49■■■□□ 2.63
HOXB3-208ENST00000476342 SMG7Q92540 1137 aaKnown RBP31.49■■■□□ 2.63
HOXB3-208ENST00000476342 MYLPFQ96A32 169 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 FAM81BQ96LP2 452 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 SEPT5Q99719 369 aaPredicted RBP31.49■■■□□ 2.63
HOXB3-208ENST00000476342 CRISPLD1Q9H336 500 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 PIDD1Q9HB75 910 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 SLC27A5Q9Y2P5 690 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 CCL16O15467 120 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 ALDH1A3P47895 512 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 CYP27A1Q02318 531 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 FKBP15Q5T1M5 1219 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 ELMOD1Q8N336 334 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 ZNF707Q96C28 371 aaPredicted RBP31.49■■■□□ 2.63
HOXB3-208ENST00000476342 PCED1BQ96HM7 432 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 NECTIN4Q96NY8 510 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 HMGXB4Q9UGU5 601 aa31.49■■■□□ 2.63
HOXB3-208ENST00000476342 UNC80Q8N2C7 3258 aa31.48■■■□□ 2.63
HOXB3-208ENST00000476342 GRXCR2A6NFK2 248 aa31.48■■■□□ 2.63
HOXB3-208ENST00000476342 LRRC10BA6NIK2 292 aa31.48■■■□□ 2.63
HOXB3-208ENST00000476342 GOLGA6L19H0YKK7 550 aa31.48■■■□□ 2.63
HOXB3-208ENST00000476342 ATP1A3P13637 1013 aa31.48■■■□□ 2.63
HOXB3-208ENST00000476342 SLC9A1P19634 815 aa31.48■■■□□ 2.63
HOXB3-208ENST00000476342 PON1P27169 355 aa31.48■■■□□ 2.63
HOXB3-208ENST00000476342 CDR1P51861 262 aa31.48■■■□□ 2.63
HOXB3-208ENST00000476342 TWF1Q12792 350 aa31.48■■■□□ 2.63
HOXB3-208ENST00000476342 CCDC142Q17RM4 750 aa31.48■■■□□ 2.63
HOXB3-208ENST00000476342 ACOT1Q86TX2 421 aa31.48■■■□□ 2.63
HOXB3-208ENST00000476342 LUZP1Q86V48 1076 aa31.48■■■□□ 2.63
HOXB3-208ENST00000476342 CRYBG2Q8N1P7 616 aa31.48■■■□□ 2.63
HOXB3-208ENST00000476342 SUSD6Q92537 303 aa31.48■■■□□ 2.63
HOXB3-208ENST00000476342 HAPLN1P10915 354 aaPredicted RBP31.47■■■□□ 2.63
HOXB3-208ENST00000476342 KCNQ1P51787 676 aa31.47■■■□□ 2.63
HOXB3-208ENST00000476342 CBX2Q14781 532 aaPredicted RBP31.47■■■□□ 2.63
HOXB3-208ENST00000476342 SMAD2Q15796 467 aaKnown RBP31.47■■■□□ 2.63
HOXB3-208ENST00000476342 RRAGAQ7L523 313 aa31.47■■■□□ 2.63
HOXB3-208ENST00000476342 ARHGEF19Q8IW93 802 aa31.47■■■□□ 2.63
HOXB3-208ENST00000476342 TTC9BQ8N6N2 239 aa31.47■■■□□ 2.63
HOXB3-208ENST00000476342 ASB2Q96Q27 587 aa31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms