RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 BOP1Q14137 746 aaKnown RBP6.07□□□□□ -1.44
PTCD3-211ENST00000476215 UBE4AQ14139 1066 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 LONRF1Q17RB8 773 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 LONRF3Q496Y0 759 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 ARHGEF19Q8IW93 802 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 COLGALT2Q8IYK4 626 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 PROKR1Q8TCW9 393 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 FBXO41Q8TF61 875 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 TRIM43Q96BQ3 446 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-211ENST00000476215 NMD3Q96D46 503 aaKnown RBP6.07□□□□□ -1.44
PTCD3-211ENST00000476215 COL20A1Q9P218 1284 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 PHTF1Q9UMS5 762 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 PAXBP1Q9Y5B6 917 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 MYADML2A6NDP7 307 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 E7ENX8 843 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 RAMP2O60895 175 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 SPDEFO95238 335 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 FOSP01100 380 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-211ENST00000476215 IFIT2P09913 472 aaKnown RBP6.06□□□□□ -1.44
PTCD3-211ENST00000476215 ITGALP20701 1170 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 GCLCP48506 637 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-211ENST00000476215 PRIM2P49643 509 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 VAV2P52735 878 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 TAP1Q03518 808 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 TAP2Q03519 686 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 DYRK1AQ13627 763 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 IQCB1Q15051 598 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 LAIR1Q6GTX8 287 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 LAYNQ6UX15 382 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 ADGRG5Q8IZF4 528 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 SVIPQ8NHG7 77 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 SNX19Q92543 992 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 TNIP3Q96KP6 325 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 MOGAT1Q96PD6 335 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 HEPHQ9BQS7 1158 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 KRTAP17-1Q9BYP8 105 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 MS4A7Q9GZW8 240 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-211ENST00000476215 PNPLA8Q9NP80 782 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 A1CFQ9NQ94 594 aaKnown RBP6.06□□□□□ -1.44
PTCD3-211ENST00000476215 TMEM74BQ9NUR3 256 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 ANKFY1Q9P2R3 1169 aa6.06□□□□□ -1.44
PTCD3-211ENST00000476215 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-211ENST00000476215 TRGV11A0A075B6L2 103 aa6.05□□□□□ -1.44
PTCD3-211ENST00000476215 FOXN3O00409 490 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-211ENST00000476215 DCLK1O15075 740 aa6.05□□□□□ -1.44
PTCD3-211ENST00000476215 SOAT2O75908 522 aa6.05□□□□□ -1.44
PTCD3-211ENST00000476215 ATXN1LP0C7T5 689 aaKnown RBP6.05□□□□□ -1.44
PTCD3-211ENST00000476215 VIPR2P41587 438 aa6.05□□□□□ -1.44
PTCD3-211ENST00000476215 NPTX2P47972 431 aa6.05□□□□□ -1.44
PTCD3-211ENST00000476215 AK2P54819 239 aa6.05□□□□□ -1.44
PTCD3-211ENST00000476215 TP53BP2Q13625 1128 aa6.05□□□□□ -1.44
PTCD3-211ENST00000476215 DCAF12L1Q5VU92 463 aa6.05□□□□□ -1.44
PTCD3-211ENST00000476215 KCNV1Q6PIU1 500 aa6.05□□□□□ -1.44
PTCD3-211ENST00000476215 TMPRSS9Q7Z410 1059 aa6.05□□□□□ -1.44
PTCD3-211ENST00000476215 MICU3Q86XE3 530 aa6.05□□□□□ -1.44
PTCD3-211ENST00000476215 OR56A3Q8NH54 315 aa6.05□□□□□ -1.44
PTCD3-211ENST00000476215 RAPGEF4Q8WZA2 1011 aa6.05□□□□□ -1.44
PTCD3-211ENST00000476215 FUBP1Q96AE4 644 aaKnown RBP6.05□□□□□ -1.44
PTCD3-211ENST00000476215 MSLNLQ96KJ4 702 aa6.05□□□□□ -1.44
PTCD3-211ENST00000476215 STRBPQ96SI9 672 aaKnown RBP6.05□□□□□ -1.44
PTCD3-211ENST00000476215 UNKQ9C0B0 810 aaKnown RBP6.05□□□□□ -1.44
PTCD3-211ENST00000476215 UNKLQ9H9P5 680 aaKnown RBP6.05□□□□□ -1.44
PTCD3-211ENST00000476215 C11orf21Q9P2W6 132 aa6.05□□□□□ -1.44
PTCD3-211ENST00000476215 F5H697 171 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 F8W8V4 182 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 PYCARD-AS1I3L0S3 204 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 OVOL3O00110 214 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 RASSF9O75901 435 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 IL18RAPO95256 599 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 CYP2C9P11712 490 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 XRCC6P12956 609 aaKnown RBP eCLIP6.04□□□□□ -1.44
PTCD3-211ENST00000476215 NDUFV1P49821 464 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 CASP5P51878 434 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 ZNF134P52741 427 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 LILRA4P59901 499 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 SATB1Q01826 763 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 DAG1Q14118 895 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 HLXQ14774 488 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-211ENST00000476215 BRD3Q15059 726 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 PTPAQ15257 358 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 SP5Q6BEB4 398 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-211ENST00000476215 TMEM108Q6UXF1 575 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 MICALCLQ6ZW33 695 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 LIX1LQ8IVB5 337 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 FAM9AQ8IZU1 332 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-211ENST00000476215 TTPALQ9BTX7 342 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 STK31Q9BXU1 1019 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 ZNF700Q9H0M5 742 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 SYBUQ9NX95 663 aa6.04□□□□□ -1.44
PTCD3-211ENST00000476215 A0A0B4J269 797 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 MBD3L4A6NDZ8 208 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-211ENST00000476215 MBD3L3A6NE82 208 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-211ENST00000476215 POM121BA6NF01 834 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 RHOBTB3O94955 611 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 GCP02774 474 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 PARP1P09874 1014 aaKnown RBP6.03□□□□□ -1.44
PTCD3-211ENST00000476215 TGM1P22735 817 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 GATA3P23771 443 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 KLRC1P26715 233 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 ADRA1BP35368 520 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms