RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 NDE1Q9NXR1 346 aa18.63■□□□□ 0.57
CCM2-207ENST00000475551 LMCD1Q9NZU5 365 aa18.63■□□□□ 0.57
CCM2-207ENST00000475551 TMCO1Q9UM00 188 aa18.63■□□□□ 0.57
CCM2-207ENST00000475551 LOXHD1Q8IVV2 1947 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 GOLGA8IPA6NC78 632 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 GOLGA8JA6NMD2 632 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 CIB2O75838 187 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 MYL2P10916 166 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 ETV4P43268 484 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 ACTR3P61158 418 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 GCNT1Q02742 428 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 TFDP1Q14186 410 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 EFTUD2Q15029 972 aaKnown RBP eCLIP18.62■□□□□ 0.57
CCM2-207ENST00000475551 SNRNP35Q16560 246 aaKnown RBP18.62■□□□□ 0.57
CCM2-207ENST00000475551 LIN9Q5TKA1 542 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 NLRX1Q86UT6 975 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 CBWD2Q8IUF1 395 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 SIAH1Q8IUQ4 282 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 ST13P4Q8IZP2 240 aaPredicted RBP18.62■□□□□ 0.57
CCM2-207ENST00000475551 TAS1R2Q8TE23 839 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 GMCL1Q96IK5 515 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 NMUR2Q9GZQ4 415 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 MIS12Q9H081 205 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 C12orf65Q9H3J6 166 aaKnown RBP18.62■□□□□ 0.57
CCM2-207ENST00000475551 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.62■□□□□ 0.57
CCM2-207ENST00000475551 DENND3A2RUS2 1198 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 CAPN14A8MX76 684 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 TM7SF2O76062 418 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 PIM1P11309 404 aaPredicted RBP18.62■□□□□ 0.57
CCM2-207ENST00000475551 GLRA2P23416 452 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 CDC16Q13042 620 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 HIF1AQ16665 826 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 RIPOR1Q6ZS17 1223 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 ANKMY2Q8IV38 441 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 GMCL1P1Q8NEA9 526 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 DCAKDQ8WVC6 231 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 PANX3Q96QZ0 392 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 PCDH9Q9HC56 1237 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 MRPL47Q9HD33 250 aaKnown RBP18.62■□□□□ 0.57
CCM2-207ENST00000475551 PLA2G4CQ9UP65 541 aa18.62■□□□□ 0.57
CCM2-207ENST00000475551 PPEF1O14829 653 aaPredicted RBP18.61■□□□□ 0.57
CCM2-207ENST00000475551 CALCAP01258 141 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 PABPC4LP0CB38 370 aaKnown RBP18.61■□□□□ 0.57
CCM2-207ENST00000475551 SLURP2P0DP57 97 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 ALDH1B1P30837 517 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 GTF2IP78347 998 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 IKQ13123 557 aaPredicted RBP18.61■□□□□ 0.57
CCM2-207ENST00000475551 OASLQ15646 514 aaKnown RBP18.61■□□□□ 0.57
CCM2-207ENST00000475551 TMCO4Q5TGY1 634 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 STYK1Q6J9G0 422 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 HAUS6Q7Z4H7 955 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 PCGF5Q86SE9 256 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 PYROXD1Q8WU10 500 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 CCDC127Q96BQ5 260 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 ZNF577Q9BSK1 485 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 TEKT3Q9BXF9 490 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 ALG13Q9NP73 1137 aaKnown RBP18.61■□□□□ 0.57
CCM2-207ENST00000475551 ZDHHC7Q9NXF8 308 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 PCDHB2Q9Y5E7 798 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 LPXNO60711 386 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 BBOX1O75936 387 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 SSTR1P30872 391 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 GTF2H1P32780 548 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 RFX8Q6ZV50 586 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 ACAD11Q709F0 780 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 ADGRG6Q86SQ4 1221 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.61■□□□□ 0.57
CCM2-207ENST00000475551 SLITRK1Q96PX8 696 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 OCEL1Q9H607 264 aa18.61■□□□□ 0.57
CCM2-207ENST00000475551 CHCHD3Q9NX63 227 aaKnown RBP18.61■□□□□ 0.57
CCM2-207ENST00000475551 FARP1Q9Y4F1 1045 aaPredicted RBP18.61■□□□□ 0.57
CCM2-207ENST00000475551 H3BRJ5 948 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 GOLGA8RI6L899 631 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 KLF11O14901 512 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 KRT10P13645 584 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 GJC1P36383 396 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 VCPP55072 806 aaKnown RBP18.6■□□□□ 0.57
CCM2-207ENST00000475551 MAMLD1Q13495 774 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 DNAL1Q4LDG9 190 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 CEP55Q53EZ4 464 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 C2CD6Q53TS8 623 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 KAZNQ674X7 775 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 LCA5Q86VQ0 697 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 NME8Q8N427 588 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 RBM15BQ8NDT2 890 aaKnown RBP18.6■□□□□ 0.57
CCM2-207ENST00000475551 TMC2Q8TDI7 906 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 KCNQ5Q9NR82 932 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 KCNK4Q9NYG8 393 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 ARMCX1Q9P291 453 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 STRIP2Q9ULQ0 834 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 RNASEH1O60930 286 aaKnown RBP18.6■□□□□ 0.57
CCM2-207ENST00000475551 FKBP6O75344 327 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 BANF1O75531 89 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 ITGAVP06756 1048 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 SHROOM1Q2M3G4 852 aaPredicted RBP18.6■□□□□ 0.57
CCM2-207ENST00000475551 C3orf62Q6ZUJ4 267 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 NKD2Q969F2 451 aaPredicted RBP18.6■□□□□ 0.57
CCM2-207ENST00000475551 VCPIP1Q96JH7 1222 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 CNTN3Q9P232 1028 aa18.6■□□□□ 0.57
CCM2-207ENST00000475551 ZNF219Q9P2Y4 722 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms