RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 UBR7Q8N806 425 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 C12orf76Q8N812 135 aaPredicted RBP16.8■□□□□ 0.28
COL1A1-204ENST00000474644 KAT5Q92993 513 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 TWNKQ96RR1 684 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 FAM124BQ9H5Z6 455 aaPredicted RBP16.8■□□□□ 0.28
COL1A1-204ENST00000474644 CYP4F11Q9HBI6 524 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 CISHQ9NSE2 258 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 THEGQ9P2T0 379 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 GTF3C4Q9UKN8 822 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 MAFFQ9ULX9 164 aa16.8■□□□□ 0.28
COL1A1-204ENST00000474644 LRRC10BA6NIK2 292 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 LGALS16A8MUM7 142 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 GOLGA6L19H0YKK7 550 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 PRRG1O14668 218 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 HOXB8P17481 243 aaPredicted RBP16.79■□□□□ 0.28
COL1A1-204ENST00000474644 ELF1P32519 619 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 NFE2Q16621 373 aaPredicted RBP16.79■□□□□ 0.28
COL1A1-204ENST00000474644 MDH1BQ5I0G3 518 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 RARS2Q5T160 578 aaKnown RBP16.79■□□□□ 0.28
COL1A1-204ENST00000474644 FKBP15Q5T1M5 1219 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 CCDC149Q6ZUS6 474 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 RRAGAQ7L523 313 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 TTC39CQ8N584 583 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 TTC9BQ8N6N2 239 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 ATAD1Q8NBU5 361 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 B3GALNT2Q8NCR0 500 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 SMRP1Q8NCR6 262 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 FEZF2Q8TBJ5 459 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 MYCBPAPQ8TBZ2 947 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 WHAMMQ8TF30 809 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 C2orf15Q8WU43 125 aaKnown RBP16.79■□□□□ 0.28
COL1A1-204ENST00000474644 MYLPFQ96A32 169 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 TNIP3Q96KP6 325 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 LPIN3Q9BQK8 851 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 APOL5Q9BWW9 433 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 SIX2Q9NPC8 291 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 ZDHHC7Q9NXF8 308 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 ABI2Q9NYB9 513 aaPredicted RBP16.79■□□□□ 0.28
COL1A1-204ENST00000474644 APEX2Q9UBZ4 518 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 CD207Q9UJ71 328 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 YIPF1Q9Y548 306 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 PCDHB5Q9Y5E4 795 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 INSL5Q9Y5Q6 135 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 BRWD1Q9NSI6 2320 aa16.79■□□□□ 0.28
COL1A1-204ENST00000474644 PTPN1P18031 435 aaKnown RBP16.78■□□□□ 0.28
COL1A1-204ENST00000474644 ACO1P21399 889 aaKnown RBP16.78■□□□□ 0.28
COL1A1-204ENST00000474644 YWHAEP62258 255 aaKnown RBP16.78■□□□□ 0.28
COL1A1-204ENST00000474644 TFF2Q03403 129 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 KCNMA1Q12791 1236 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 DUSP4Q13115 394 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 MAPRE1Q15691 268 aaKnown RBP16.78■□□□□ 0.28
COL1A1-204ENST00000474644 UVSSAQ2YD98 709 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 LEXMQ3ZCV2 418 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 PPM1LQ5SGD2 360 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 GJB7Q6PEY0 223 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 TMC5Q6UXY8 1006 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 ACOT1Q86TX2 421 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 CMASQ8NFW8 434 aaPredicted RBP16.78■□□□□ 0.28
COL1A1-204ENST00000474644 SPPL2BQ8TCT7 592 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 ZNF707Q96C28 371 aaPredicted RBP16.78■□□□□ 0.28
COL1A1-204ENST00000474644 PCED1BQ96HM7 432 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 KREMEN1Q96MU8 473 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 NT5C1AQ9BXI3 368 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 ELOVL4Q9GZR5 314 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 S1PR5Q9H228 398 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 HSFX1Q9UBD0 423 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 SLC27A5Q9Y2P5 690 aa16.78■□□□□ 0.28
COL1A1-204ENST00000474644 PAPLNO95428 1278 aa16.77■□□□□ 0.28
COL1A1-204ENST00000474644 HNRNPA1P09651 372 aaKnown RBP eCLIP16.77■□□□□ 0.28
COL1A1-204ENST00000474644 HOXA9P31269 272 aa16.77■□□□□ 0.28
COL1A1-204ENST00000474644 CFAP221Q4G0U5 840 aa16.77■□□□□ 0.28
COL1A1-204ENST00000474644 DPY19L2P1Q6NXN4 242 aa16.77■□□□□ 0.28
COL1A1-204ENST00000474644 C4orf50Q6ZRC1 276 aa16.77■□□□□ 0.28
COL1A1-204ENST00000474644 RTL10Q7L3V2 364 aa16.77■□□□□ 0.28
COL1A1-204ENST00000474644 SPATA2LQ8IUW3 424 aaPredicted RBP16.77■□□□□ 0.28
COL1A1-204ENST00000474644 CRYBG2Q8N1P7 616 aa16.77■□□□□ 0.28
COL1A1-204ENST00000474644 FUBP3Q96I24 572 aaKnown RBP eCLIP16.77■□□□□ 0.28
COL1A1-204ENST00000474644 SEPT5Q99719 369 aaPredicted RBP16.77■□□□□ 0.28
COL1A1-204ENST00000474644 LSM14BQ9BX40 385 aaKnown RBP16.77■□□□□ 0.28
COL1A1-204ENST00000474644 RHOBTB2Q9BYZ6 727 aa16.77■□□□□ 0.28
COL1A1-204ENST00000474644 ADAM7Q9H2U9 754 aa16.77■□□□□ 0.28
COL1A1-204ENST00000474644 ABCB6Q9NP58 842 aa16.77■□□□□ 0.28
COL1A1-204ENST00000474644 UBE2TQ9NPD8 197 aaPredicted RBP16.77■□□□□ 0.28
COL1A1-204ENST00000474644 CDH22Q9UJ99 828 aa16.77■□□□□ 0.28
COL1A1-204ENST00000474644 XIRP2A4UGR9 3374 aa16.76■□□□□ 0.27
COL1A1-204ENST00000474644 CCDC195A0A1B0GUA6 201 aa16.76■□□□□ 0.27
COL1A1-204ENST00000474644 CCL16O15467 120 aa16.76■□□□□ 0.27
COL1A1-204ENST00000474644 SOAT2O75908 522 aa16.76■□□□□ 0.27
COL1A1-204ENST00000474644 LRG1P02750 347 aa16.76■□□□□ 0.27
COL1A1-204ENST00000474644 POU2F2P09086 479 aa16.76■□□□□ 0.27
COL1A1-204ENST00000474644 HAPLN1P10915 354 aaPredicted RBP16.76■□□□□ 0.27
COL1A1-204ENST00000474644 RAD23BP54727 409 aa16.76■□□□□ 0.27
COL1A1-204ENST00000474644 CYP27A1Q02318 531 aa16.76■□□□□ 0.27
COL1A1-204ENST00000474644 ITIH3Q06033 890 aa16.76■□□□□ 0.27
COL1A1-204ENST00000474644 SMAD4Q13485 552 aaKnown RBP16.76■□□□□ 0.27
COL1A1-204ENST00000474644 ZNF394Q53GI3 561 aa16.76■□□□□ 0.27
COL1A1-204ENST00000474644 GPR149Q86SP6 731 aa16.76■□□□□ 0.27
COL1A1-204ENST00000474644 SLC4A11Q8NBS3 891 aa16.76■□□□□ 0.27
COL1A1-204ENST00000474644 RNF214Q8ND24 703 aa16.76■□□□□ 0.27
COL1A1-204ENST00000474644 PRKD2Q9BZL6 878 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms