RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 MON1AQ86VX9 555 aa14.57□□□□□ -0.08
CHD3-209ENST00000473376 PDCL2Q8N4E4 241 aa14.57□□□□□ -0.08
CHD3-209ENST00000473376 C1orf127Q8N9H9 656 aa14.57□□□□□ -0.08
CHD3-209ENST00000473376 LPIN3Q9BQK8 851 aa14.57□□□□□ -0.08
CHD3-209ENST00000473376 FAM213AQ9BRX8 229 aa14.57□□□□□ -0.08
CHD3-209ENST00000473376 TNMDQ9H2S6 317 aa14.57□□□□□ -0.08
CHD3-209ENST00000473376 RBAKQ9NYW8 714 aaPredicted RBP14.57□□□□□ -0.08
CHD3-209ENST00000473376 CEP250Q9BV73 2442 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 SLC38A8A6NNN8 435 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 K7ESF4 209 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 TRDMT1O14717 391 aaKnown RBP14.56□□□□□ -0.08
CHD3-209ENST00000473376 NOL4O94818 638 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 STAT6P42226 847 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 TFAMQ00059 246 aaKnown RBP14.56□□□□□ -0.08
CHD3-209ENST00000473376 AMPD3Q01432 767 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 KCNA1Q09470 495 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 PDGFRLQ15198 375 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 MAPRE1Q15691 268 aaKnown RBP14.56□□□□□ -0.08
CHD3-209ENST00000473376 TMEM150AQ86TG1 271 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 CCDC65Q8IXS2 484 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 SYCP3Q8IZU3 236 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 MRPS31Q92665 395 aaKnown RBP14.56□□□□□ -0.08
CHD3-209ENST00000473376 PKMYT1Q99640 499 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 RTKNQ9BST9 563 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 TDP1Q9NUW8 608 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 PANK4Q9NVE7 773 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 ABI2Q9NYB9 513 aaPredicted RBP14.56□□□□□ -0.08
CHD3-209ENST00000473376 GTSE1Q9NYZ3 720 aa14.56□□□□□ -0.08
CHD3-209ENST00000473376 NUP210Q8TEM1 1887 aaPredicted RBP14.55□□□□□ -0.08
CHD3-209ENST00000473376 EIF3DO15371 548 aaKnown RBP eCLIP14.55□□□□□ -0.08
CHD3-209ENST00000473376 PPP6R2O75170 966 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 SOAT2O75908 522 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 PRAMEF12O95522 483 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 ITGB3P05106 788 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 TCF3P15923 654 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 POLR2BP30876 1174 aaKnown RBP14.55□□□□□ -0.08
CHD3-209ENST00000473376 MAGEA11P43364 429 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 PDE6CP51160 858 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 SATB1Q01826 763 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 MYO1EQ12965 1108 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 RUNX3Q13761 415 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 RSPO4Q2I0M5 234 aaPredicted RBP14.55□□□□□ -0.08
CHD3-209ENST00000473376 FBXO43Q4G163 708 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 TMEM196Q5HYL7 178 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 INTS6LQ5JSJ4 861 aaKnown RBP14.55□□□□□ -0.08
CHD3-209ENST00000473376 FAM171BQ6P995 826 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 TXNDC11Q6PKC3 985 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 GPD1LQ8N335 351 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 CSGALNACT2Q8N6G5 542 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 CCDC26Q8TAB7 109 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 LOXL4Q96JB6 756 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 CLIC6Q96NY7 704 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 KBTBD4Q9NVX7 518 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 DDX43Q9NXZ2 648 aaKnown RBP14.55□□□□□ -0.08
CHD3-209ENST00000473376 EHD2Q9NZN4 543 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 AGAP1Q9UPQ3 857 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 TSC2P49815 1807 aa14.55□□□□□ -0.08
CHD3-209ENST00000473376 SCN1AP35498 2009 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 ZNF233A6NK53 670 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 CHURC1-FNTBB4DL54 471 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 PRPF40AO75400 957 aaKnown RBP14.54□□□□□ -0.08
CHD3-209ENST00000473376 AKAP3O75969 853 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 IDEP14735 1019 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 GRSF1Q12849 480 aaKnown RBP eCLIP14.54□□□□□ -0.08
CHD3-209ENST00000473376 BFSP1Q12934 665 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 DUOXA2Q1HG44 320 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 VSTM1Q6UX27 236 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 C4orf50Q6ZRC1 276 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 WDR5BQ86VZ2 330 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 CAMKK1Q8N5S9 505 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 FSIP1Q8NA03 581 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 USP13Q92995 863 aaPredicted RBP14.54□□□□□ -0.08
CHD3-209ENST00000473376 ANKRD36BP1Q96IX9 119 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 MAGEF1Q9HAY2 307 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 GKN1Q9NS71 199 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 INTS13Q9NVM9 706 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 L1RE1Q9UN81 338 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 MTMR6Q9Y217 621 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 R3HCC1Q9Y3T6 440 aaKnown RBP14.54□□□□□ -0.08
CHD3-209ENST00000473376 ANK1P16157 1881 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 TICRRQ7Z2Z1 1910 aa14.54□□□□□ -0.08
CHD3-209ENST00000473376 STX6O43752 255 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 TMEM191BP0C7N4 346 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 DRD1P21728 446 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 PPP3CCP48454 512 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 CASP5P51878 434 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 CYP4F8P98187 520 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 FAM160A1Q05DH4 1040 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 SIM2Q14190 667 aaPredicted RBP14.53□□□□□ -0.08
CHD3-209ENST00000473376 CSRP2Q16527 193 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 WDR44Q5JSH3 913 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 CC2D1AQ6P1N0 951 aaPredicted RBP14.53□□□□□ -0.08
CHD3-209ENST00000473376 WDR49Q8IV35 697 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 MAB21L3Q8N8X9 362 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 LINC00301Q8NCQ3 95 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 GIPC2Q8TF65 315 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 SPATA17Q96L03 361 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 USP28Q96RU2 1077 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 CBWD1Q9BRT8 395 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 TMLHEQ9NVH6 421 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms