RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SPAARA0A1B0GVQ0 90 aa20.57■□□□□ 0.88
SORT1-203ENST00000471996 FAM221BA6H8Z2 402 aa20.57■□□□□ 0.88
SORT1-203ENST00000471996 CAPNS1P04632 268 aa20.57■□□□□ 0.88
SORT1-203ENST00000471996 MAPTP10636 758 aaKnown RBP20.57■□□□□ 0.88
SORT1-203ENST00000471996 MATR3P43243 847 aaKnown RBP eCLIP20.57■□□□□ 0.881e-7■■■□□ 19.2
SORT1-203ENST00000471996 SIM1P81133 766 aaPredicted RBP20.57■□□□□ 0.88
SORT1-203ENST00000471996 SMARCB1Q12824 385 aa20.57■□□□□ 0.88
SORT1-203ENST00000471996 MTF1Q14872 753 aa20.57■□□□□ 0.88
SORT1-203ENST00000471996 ANKRD1Q15327 319 aa20.57■□□□□ 0.88
SORT1-203ENST00000471996 PIP4P1Q86T03 277 aa20.57■□□□□ 0.88
SORT1-203ENST00000471996 SPPL2BQ8TCT7 592 aa20.57■□□□□ 0.88
SORT1-203ENST00000471996 SNX29Q8TEQ0 813 aa20.57■□□□□ 0.88
SORT1-203ENST00000471996 MRPS31Q92665 395 aaKnown RBP20.57■□□□□ 0.88
SORT1-203ENST00000471996 GTF3C6Q969F1 213 aa20.57■□□□□ 0.88
SORT1-203ENST00000471996 COL26A1Q96A83 441 aa20.57■□□□□ 0.88
SORT1-203ENST00000471996 DUS2Q9NX74 493 aaKnown RBP20.57■□□□□ 0.88
SORT1-203ENST00000471996 KCNG1Q9UIX4 513 aa20.57■□□□□ 0.88
SORT1-203ENST00000471996 STK24Q9Y6E0 443 aa20.57■□□□□ 0.88
SORT1-203ENST00000471996 ABCA7Q8IZY2 2146 aa20.57■□□□□ 0.88
SORT1-203ENST00000471996 SMG1Q96Q15 3661 aaKnown RBP20.57■□□□□ 0.88
SORT1-203ENST00000471996 UPK3BL1B0FP48 263 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 UPK3BL2E5RIL1 263 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 H0Y626 953 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 JAK2O60674 1132 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 TRIM16O95361 564 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 ADRB2P07550 413 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 MAPK8P45983 427 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 SEMA3BQ13214 749 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 PDIA5Q14554 519 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 SAFBQ15424 915 aaKnown RBP eCLIP20.56■□□□□ 0.88
SORT1-203ENST00000471996 ME3Q16798 604 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 SOWAHCQ53LP3 525 aaPredicted RBP20.56■□□□□ 0.88
SORT1-203ENST00000471996 C9orf57Q5W0N0 161 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 LRRTM3Q86VH5 581 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 C4orf32Q8N8J7 132 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 USP33Q8TEY7 942 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 ATP2A3Q93084 1043 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 TIPINQ9BVW5 301 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 DSEQ9UL01 958 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 GPSM3Q9Y4H4 160 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 NBEAQ8NFP9 2946 aa20.56■□□□□ 0.88
SORT1-203ENST00000471996 NUP205Q92621 2012 aa20.55■□□□□ 0.88
SORT1-203ENST00000471996 PLS3P13797 630 aa20.55■□□□□ 0.88
SORT1-203ENST00000471996 ENGP17813 658 aa20.55■□□□□ 0.88
SORT1-203ENST00000471996 GUCY2CP25092 1073 aa20.55■□□□□ 0.88
SORT1-203ENST00000471996 RDXP35241 583 aaKnown RBP20.55■□□□□ 0.88
SORT1-203ENST00000471996 IFNAR2P48551 515 aa20.55■□□□□ 0.88
SORT1-203ENST00000471996 SMTNP53814 917 aa20.55■□□□□ 0.88
SORT1-203ENST00000471996 FAM160A1Q05DH4 1040 aa20.55■□□□□ 0.88
SORT1-203ENST00000471996 ENOX2Q16206 610 aaKnown RBP20.55■□□□□ 0.88
SORT1-203ENST00000471996 KYAT1Q16773 422 aa20.55■□□□□ 0.88
SORT1-203ENST00000471996 THEM5Q8N1Q8 247 aa20.55■□□□□ 0.88
SORT1-203ENST00000471996 MDGA1Q8NFP4 955 aa20.55■□□□□ 0.88
SORT1-203ENST00000471996 OLIG1Q8TAK6 271 aa20.55■□□□□ 0.88
SORT1-203ENST00000471996 RPF1Q9H9Y2 349 aaKnown RBP20.55■□□□□ 0.88
SORT1-203ENST00000471996 ABI2Q9NYB9 513 aaPredicted RBP20.55■□□□□ 0.88
SORT1-203ENST00000471996 FREM2Q5SZK8 3169 aa20.55■□□□□ 0.88
SORT1-203ENST00000471996 PIRO00625 290 aa20.54■□□□□ 0.88
SORT1-203ENST00000471996 TNFRSF10BO14763 440 aa20.54■□□□□ 0.88
SORT1-203ENST00000471996 NR1H3Q13133 447 aa20.54■□□□□ 0.88
SORT1-203ENST00000471996 ZNF77Q15935 545 aa20.54■□□□□ 0.88
SORT1-203ENST00000471996 EML3Q32P44 896 aa20.54■□□□□ 0.88
SORT1-203ENST00000471996 C2orf27AQ580R0 203 aa20.54■□□□□ 0.88
SORT1-203ENST00000471996 TTC38Q5R3I4 469 aa20.54■□□□□ 0.88
SORT1-203ENST00000471996 LPCAT2Q7L5N7 544 aa20.54■□□□□ 0.88
SORT1-203ENST00000471996 METTL23Q86XA0 190 aa20.54■□□□□ 0.88
SORT1-203ENST00000471996 SYT12Q8IV01 421 aa20.54■□□□□ 0.88
SORT1-203ENST00000471996 IGSF22Q8N9C0 903 aa20.54■□□□□ 0.88
SORT1-203ENST00000471996 TMEM74BQ9NUR3 256 aa20.54■□□□□ 0.88
SORT1-203ENST00000471996 MMP17Q9ULZ9 603 aa20.54■□□□□ 0.88
SORT1-203ENST00000471996 WNT6Q9Y6F9 365 aa20.54■□□□□ 0.88
SORT1-203ENST00000471996 ANO9A1A5B4 782 aa20.53■□□□□ 0.88
SORT1-203ENST00000471996 K7EQS6 105 aa20.53■□□□□ 0.88
SORT1-203ENST00000471996 FAM189A1O60320 539 aa20.53■□□□□ 0.88
SORT1-203ENST00000471996 CSH1P0DML2 217 aa20.53■□□□□ 0.88
SORT1-203ENST00000471996 CSH2P0DML3 217 aa20.53■□□□□ 0.88
SORT1-203ENST00000471996 GUCY1B3Q02153 619 aa20.53■□□□□ 0.88
SORT1-203ENST00000471996 CRY1Q16526 586 aa20.53■□□□□ 0.88
SORT1-203ENST00000471996 JADE1Q6IE81 842 aa20.53■□□□□ 0.88
SORT1-203ENST00000471996 SLC23A3Q6PIS1 610 aa20.53■□□□□ 0.88
SORT1-203ENST00000471996 C19orf48Q6RUI8 117 aa20.53■□□□□ 0.88
SORT1-203ENST00000471996 CHCHD4Q8N4Q1 142 aa20.53■□□□□ 0.88
SORT1-203ENST00000471996 BICD1Q96G01 975 aa20.53■□□□□ 0.88
SORT1-203ENST00000471996 FNBP1Q96RU3 617 aa20.53■□□□□ 0.88
SORT1-203ENST00000471996 MAGED2Q9UNF1 606 aaPredicted RBP20.53■□□□□ 0.88
SORT1-203ENST00000471996 ASCC3Q8N3C0 2202 aaKnown RBP20.53■□□□□ 0.88
SORT1-203ENST00000471996 CYB561D2O14569 222 aa20.52■□□□□ 0.88
SORT1-203ENST00000471996 TADA3O75528 432 aa20.52■□□□□ 0.88
SORT1-203ENST00000471996 ALDH1A2O94788 518 aa20.52■□□□□ 0.88
SORT1-203ENST00000471996 P2RY2P41231 377 aa20.52■□□□□ 0.88
SORT1-203ENST00000471996 PTGER3P43115 390 aa20.52■□□□□ 0.88
SORT1-203ENST00000471996 SEC13P55735 322 aa20.52■□□□□ 0.88
SORT1-203ENST00000471996 RAD51AP2Q09MP3 1159 aa20.52■□□□□ 0.88
SORT1-203ENST00000471996 USP4Q13107 963 aa20.52■□□□□ 0.88
SORT1-203ENST00000471996 KCNK18Q7Z418 384 aa20.52■□□□□ 0.88
SORT1-203ENST00000471996 PDZD3Q86UT5 571 aa20.52■□□□□ 0.88
SORT1-203ENST00000471996 CD302Q8IX05 232 aa20.52■□□□□ 0.88
SORT1-203ENST00000471996 DCP1BQ8IZD4 617 aaKnown RBP20.52■□□□□ 0.88
SORT1-203ENST00000471996 RAB34Q9BZG1 259 aa20.52■□□□□ 0.88
SORT1-203ENST00000471996 TMEM206Q9H813 350 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms