RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 VCPIP1Q96JH7 1222 aa18.58■□□□□ 0.56
HSPG2-208ENST00000471322 MMS19Q96T76 1030 aa18.58■□□□□ 0.56
HSPG2-208ENST00000471322 SELENOOQ9BVL4 669 aa18.58■□□□□ 0.56
HSPG2-208ENST00000471322 BCO2Q9BYV7 579 aa18.58■□□□□ 0.56
HSPG2-208ENST00000471322 ABCB6Q9NP58 842 aa18.58■□□□□ 0.56
HSPG2-208ENST00000471322 ARGLU1Q9NWB6 273 aaPredicted RBP18.58■□□□□ 0.56
HSPG2-208ENST00000471322 RNF216Q9NWF9 866 aaPredicted RBP18.58■□□□□ 0.56
HSPG2-208ENST00000471322 ZNF185O15231 689 aa18.57■□□□□ 0.56
HSPG2-208ENST00000471322 THAP12O43422 761 aa18.57■□□□□ 0.56
HSPG2-208ENST00000471322 BUB1BO60566 1050 aaPredicted RBP18.57■□□□□ 0.56
HSPG2-208ENST00000471322 ITGA4P13612 1032 aa18.57■□□□□ 0.56
HSPG2-208ENST00000471322 CTNNB1P35222 781 aa18.57■□□□□ 0.56
HSPG2-208ENST00000471322 NSFP46459 744 aaKnown RBP18.57■□□□□ 0.56
HSPG2-208ENST00000471322 ERVK-21P61565 698 aa18.57■□□□□ 0.56
HSPG2-208ENST00000471322 CENPCQ03188 943 aa18.57■□□□□ 0.56
HSPG2-208ENST00000471322 WDR72Q3MJ13 1102 aa18.57■□□□□ 0.56
HSPG2-208ENST00000471322 C11orf63Q6NUN7 778 aa18.57■□□□□ 0.56
HSPG2-208ENST00000471322 FAM43BQ6ZT52 329 aaPredicted RBP18.57■□□□□ 0.56
HSPG2-208ENST00000471322 CXorf38Q8TB03 319 aa18.57■□□□□ 0.56
HSPG2-208ENST00000471322 COG1Q8WTW3 980 aa18.57■□□□□ 0.56
HSPG2-208ENST00000471322 SNX27Q96L92 541 aa18.57■□□□□ 0.56
HSPG2-208ENST00000471322 OSGEPQ9NPF4 335 aa18.57■□□□□ 0.56
HSPG2-208ENST00000471322 AVENQ9NQS1 362 aaPredicted RBP18.57■□□□□ 0.56
HSPG2-208ENST00000471322 SNTG2Q9NY99 539 aa18.57■□□□□ 0.56
HSPG2-208ENST00000471322 KLK14Q9P0G3 267 aa18.57■□□□□ 0.56
HSPG2-208ENST00000471322 STXBP5LQ9Y2K9 1186 aa18.57■□□□□ 0.56
HSPG2-208ENST00000471322 FNDC1Q4ZHG4 1894 aaPredicted RBP18.57■□□□□ 0.56
HSPG2-208ENST00000471322 LSM8O95777 96 aaKnown RBP18.56■□□□□ 0.56
HSPG2-208ENST00000471322 IGFBP4P22692 258 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 MLH1P40692 756 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 MYO1EQ12965 1108 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 ADGRE1Q14246 886 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 LIN9Q5TKA1 542 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 GLB1LQ6UWU2 654 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 MRPL10Q7Z7H8 261 aaKnown RBP18.56■□□□□ 0.56
HSPG2-208ENST00000471322 NT5DC3Q86UY8 548 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 ZNF606Q8WXB4 792 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 ZNF653Q96CK0 615 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 PGBD4Q96DM1 585 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 HPDLQ96IR7 371 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 ZFP42Q96MM3 310 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 RSAD1Q9HA92 442 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 NXF1Q9UBU9 619 aaKnown RBP18.56■□□□□ 0.56
HSPG2-208ENST00000471322 PARP2Q9UGN5 583 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 AGAP1Q9UPQ3 857 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 HOXA2O43364 376 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 XPOTO43592 962 aaKnown RBP18.56■□□□□ 0.56
HSPG2-208ENST00000471322 POMCP01189 267 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 PAEPP09466 180 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 WEE2P0C1S8 567 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 CD58P19256 250 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 POLR2BP30876 1174 aaKnown RBP18.56■□□□□ 0.56
HSPG2-208ENST00000471322 SCARA3Q6AZY7 606 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 CCDC70Q6NSX1 233 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 MCOLN2Q8IZK6 566 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 FBXO22Q8NEZ5 403 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 BEST2Q8NFU1 509 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 HES6Q96HZ4 224 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 RPS6KC1Q96S38 1066 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 GAD1Q99259 594 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 ZNF518BQ9C0D4 1074 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 CNTN3Q9P232 1028 aa18.56■□□□□ 0.56
HSPG2-208ENST00000471322 MED7O43513 233 aa18.55■□□□□ 0.56
HSPG2-208ENST00000471322 CXCR5P32302 372 aa18.55■□□□□ 0.56
HSPG2-208ENST00000471322 ZBTB6Q15916 424 aa18.55■□□□□ 0.56
HSPG2-208ENST00000471322 NOMO2Q5JPE7 1267 aa18.55■□□□□ 0.56
HSPG2-208ENST00000471322 ALKAL1Q6UXT8 129 aa18.55■□□□□ 0.56
HSPG2-208ENST00000471322 PHF13Q86YI8 300 aaPredicted RBP18.55■□□□□ 0.56
HSPG2-208ENST00000471322 PDCL2Q8N4E4 241 aa18.55■□□□□ 0.56
HSPG2-208ENST00000471322 CLP1Q92989 425 aaKnown RBP18.55■□□□□ 0.56
HSPG2-208ENST00000471322 CYFIP2Q96F07 1278 aa18.55■□□□□ 0.56
HSPG2-208ENST00000471322 CXCL16Q9H2A7 254 aa18.55■□□□□ 0.56
HSPG2-208ENST00000471322 CWH43Q9H720 699 aa18.55■□□□□ 0.56
HSPG2-208ENST00000471322 CNOT8Q9UFF9 292 aaKnown RBP18.55■□□□□ 0.56
HSPG2-208ENST00000471322 COG5Q9UP83 839 aa18.55■□□□□ 0.56
HSPG2-208ENST00000471322 ARL5CA6NH57 179 aa18.54■□□□□ 0.56
HSPG2-208ENST00000471322 MIF4GDA9UHW6 222 aaKnown RBP18.54■□□□□ 0.56
HSPG2-208ENST00000471322 PDE2AO00408 941 aaPredicted RBP18.54■□□□□ 0.56
HSPG2-208ENST00000471322 KCNK3O14649 394 aa18.54■□□□□ 0.56
HSPG2-208ENST00000471322 FOSL2P15408 326 aa18.54■□□□□ 0.56
HSPG2-208ENST00000471322 H2AFXP16104 143 aaPredicted RBP18.54■□□□□ 0.56
HSPG2-208ENST00000471322 BMPR1AP36894 532 aa18.54■□□□□ 0.56
HSPG2-208ENST00000471322 RBM10P98175 930 aaKnown RBP18.54■□□□□ 0.56
HSPG2-208ENST00000471322 RNASELQ05823 741 aaKnown RBP18.54■□□□□ 0.56
HSPG2-208ENST00000471322 NAA35Q5VZE5 725 aa18.54■□□□□ 0.56
HSPG2-208ENST00000471322 LRRC43Q8N309 656 aa18.54■□□□□ 0.56
HSPG2-208ENST00000471322 MICALL1Q8N3F8 863 aa18.54■□□□□ 0.56
HSPG2-208ENST00000471322 MSANTD4Q8NCY6 345 aa18.54■□□□□ 0.56
HSPG2-208ENST00000471322 PSMB7Q99436 277 aa18.54■□□□□ 0.56
HSPG2-208ENST00000471322 NUP85Q9BW27 656 aa18.54■□□□□ 0.56
HSPG2-208ENST00000471322 ALG13Q9NP73 1137 aaKnown RBP18.54■□□□□ 0.56
HSPG2-208ENST00000471322 TBC1D13Q9NVG8 400 aa18.54■□□□□ 0.56
HSPG2-208ENST00000471322 UBQLN1Q9UMX0 589 aaKnown RBP18.54■□□□□ 0.56
HSPG2-208ENST00000471322 PCDHGC3Q9UN70 934 aa18.54■□□□□ 0.56
HSPG2-208ENST00000471322 POLIQ9UNA4 740 aa18.54■□□□□ 0.56
HSPG2-208ENST00000471322 CEP83Q9Y592 693 aa18.54■□□□□ 0.56
HSPG2-208ENST00000471322 PRRC2BQ5JSZ5 2229 aaKnown RBP18.53■□□□□ 0.56
HSPG2-208ENST00000471322 NT5C1B-RDH14C9J2C7 533 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 B4GALT3O60512 393 aa18.53■□□□□ 0.56
HSPG2-208ENST00000471322 RECQL4O94761 1208 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms