RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 STYK1Q6J9G0 422 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 ZNF398Q8TD17 642 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 GJD4Q96KN9 370 aaPredicted RBP11□□□□□ -0.65
RRP1B-202ENST00000470886 CGRRF1Q99675 332 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 KLHL11Q9NVR0 708 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 ZNF70Q9UC06 446 aaPredicted RBP11□□□□□ -0.65
RRP1B-202ENST00000470886 WDR3Q9UNX4 943 aaKnown RBP eCLIP11□□□□□ -0.65
RRP1B-202ENST00000470886 MAGEB2O15479 319 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 POLBP06746 335 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 ABHD2P08910 425 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 MYBL2P10244 700 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 TSHRP16473 764 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 NAMPTP43490 491 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 DSG1Q02413 1049 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 OCA2Q04671 838 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 TMED1Q13445 227 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 BAATQ14032 418 aaPredicted RBP11□□□□□ -0.65
RRP1B-202ENST00000470886 SPOCD1Q6ZMY3 1216 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 MCOLN2Q8IZK6 566 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 RNF149Q8NC42 400 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 RBM46Q8TBY0 533 aaKnown RBP11□□□□□ -0.65
RRP1B-202ENST00000470886 MAGEC3Q8TD91 643 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 DTX3LQ8TDB6 740 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 CYP4F11Q9HBI6 524 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 BCS1LQ9Y276 419 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 TMX2Q9Y320 296 aa11□□□□□ -0.65
RRP1B-202ENST00000470886 A0A0U1RQJ8 604 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 EEF1B2P24534 225 aaKnown RBP10.99□□□□□ -0.65
RRP1B-202ENST00000470886 PDK1Q15118 436 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 NPY5RQ15761 445 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 PCNX4Q63HM2 1172 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 RASGEF1CQ8N431 466 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 CKAP2Q8WWK9 683 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 MKL1Q969V6 931 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 CBWD1Q9BRT8 395 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 FSD1LQ9BXM9 530 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 EIF2AQ9BY44 585 aaKnown RBP10.99□□□□□ -0.65
RRP1B-202ENST00000470886 PRMT7Q9NVM4 692 aaPredicted RBP10.99□□□□□ -0.65
RRP1B-202ENST00000470886 ADA2Q9NZK5 511 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 DCDC2Q9UHG0 476 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 TRIM49D1C9J1S8 452 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 C21orf2O43822 256 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 KRT16P08779 473 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 PMLP29590 882 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 EEF1DP29692 281 aaKnown RBP10.99□□□□□ -0.65
RRP1B-202ENST00000470886 SKIV2L2P42285 1042 aaKnown RBP10.99□□□□□ -0.65
RRP1B-202ENST00000470886 COPAP53621 1224 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 VCPP55072 806 aaKnown RBP10.99□□□□□ -0.65
RRP1B-202ENST00000470886 ELF3P78545 371 aaPredicted RBP10.99□□□□□ -0.65
RRP1B-202ENST00000470886 INPP5AQ14642 412 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 NFIL3Q16649 462 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 DUPD1Q68J44 220 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 PID1Q7Z2X4 250 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 PRPF39Q86UA1 669 aaKnown RBP10.99□□□□□ -0.65
RRP1B-202ENST00000470886 SLC26A11Q86WA9 606 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 CBWD2Q8IUF1 395 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 NDUFAF2Q8N183 169 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 SLC20A1Q8WUM9 679 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 FAM193BQ96PV7 902 aaPredicted RBP10.99□□□□□ -0.65
RRP1B-202ENST00000470886 ALG13Q9NP73 1137 aaKnown RBP10.99□□□□□ -0.65
RRP1B-202ENST00000470886 HAO1Q9UJM8 370 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 F8W8V4 182 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 RRM1P23921 792 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 LAMB3Q13751 1172 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 RNF43Q68DV7 783 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 DSTYKQ6XUX3 929 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.99□□□□□ -0.65
RRP1B-202ENST00000470886 ABRAQ8N0Z2 381 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 CCNYL1Q8N7R7 359 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 DDI1Q8WTU0 396 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 TSPAN17Q96FV3 270 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 WRNIP1Q96S55 665 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 EPAS1Q99814 870 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 PHACTR1Q9C0D0 580 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 LRRC4BQ9NT99 713 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 DLGAP2Q9P1A6 1054 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 STARD13Q9Y3M8 1113 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 CICQ96RK0 1608 aaPredicted RBP10.99□□□□□ -0.65
RRP1B-202ENST00000470886 ASB14A6NK59 587 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 SNX3O60493 162 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 RARAP10276 462 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 GRK2P25098 689 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 NPTX2P47972 431 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 RCN1Q15293 331 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 MTFR1Q15390 333 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 PLA2G4FQ68DD2 849 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 CEP70Q8NHQ1 597 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 NT5C1AQ9BXI3 368 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 MRPL1Q9BYD6 325 aaKnown RBP10.99□□□□□ -0.65
RRP1B-202ENST00000470886 PCMTD2Q9NV79 361 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 ARHGAP26Q9UNA1 814 aa10.99□□□□□ -0.65
RRP1B-202ENST00000470886 GNAT1P11488 350 aa10.98□□□□□ -0.65
RRP1B-202ENST00000470886 ALADP13716 330 aa10.98□□□□□ -0.65
RRP1B-202ENST00000470886 SHMT1P34896 483 aa10.98□□□□□ -0.65
RRP1B-202ENST00000470886 ABCE1P61221 599 aaKnown RBP10.98□□□□□ -0.65
RRP1B-202ENST00000470886 DALRD3Q5D0E6 543 aaKnown RBP10.98□□□□□ -0.65
RRP1B-202ENST00000470886 ZNF772Q68DY9 489 aaPredicted RBP10.98□□□□□ -0.65
RRP1B-202ENST00000470886 OTOP1Q7RTM1 612 aa10.98□□□□□ -0.65
RRP1B-202ENST00000470886 ZCCHC9Q8N567 271 aaKnown RBP10.98□□□□□ -0.65
RRP1B-202ENST00000470886 CHST13Q8NET6 341 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms