RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 TRNAU1APQ9NX07 287 aaKnown RBP10.42□□□□□ -0.74
NUP50-214ENST00000469163 SLC9A2Q9UBY0 812 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 ZNF536O15090 1300 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 NDUFA10O95299 355 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 CHRNB1P11230 501 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 TNNI1P19237 187 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 GJA5P36382 358 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 SREBF1P36956 1147 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 QARSP47897 775 aaKnown RBP10.42□□□□□ -0.74
NUP50-214ENST00000469163 CLCN3P51790 818 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 ERVK-9P63128 1117 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 CYP27A1Q02318 531 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 C15orf59Q2T9L4 293 aaPredicted RBP10.42□□□□□ -0.74
NUP50-214ENST00000469163 RRAGAQ7L523 313 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 FAM13CQ8NE31 585 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 CASKIN2Q8WXE0 1202 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 SLC7A3Q8WY07 619 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 BRI3BPQ8WY22 251 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 CHP1Q99653 195 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 ZBED2Q9BTP6 218 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 DCLRE1BQ9H816 532 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 PTTG2Q9NZH5 202 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 SCHIP1Q9P0W5 487 aaPredicted RBP10.42□□□□□ -0.74
NUP50-214ENST00000469163 WRAP73Q9P2S5 460 aaPredicted RBP10.42□□□□□ -0.74
NUP50-214ENST00000469163 ZNF214Q9UL59 606 aaPredicted RBP10.42□□□□□ -0.74
NUP50-214ENST00000469163 HPSEQ9Y251 543 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 USP15Q9Y4E8 981 aaPredicted RBP10.42□□□□□ -0.74
NUP50-214ENST00000469163 COL11A2P13942 1736 aaPredicted RBP10.42□□□□□ -0.74
NUP50-214ENST00000469163 ACTR2P61160 394 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 MTMR3Q13615 1198 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 C16orf72Q14CZ0 275 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 KRT31Q15323 416 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 CCL14Q16627 93 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 TMCO4Q5TGY1 634 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 ALDH16A1Q8IZ83 802 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 CNOT10Q9H9A5 744 aaKnown RBP10.42□□□□□ -0.74
NUP50-214ENST00000469163 C12orf4Q9NQ89 552 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 CHORDC1Q9UHD1 332 aaPredicted RBP10.42□□□□□ -0.74
NUP50-214ENST00000469163 KLF15Q9UIH9 416 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 TMCC3Q9ULS5 477 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 PCDHGA3Q9Y5H0 932 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 TLL2Q9Y6L7 1015 aa10.42□□□□□ -0.74
NUP50-214ENST00000469163 MYH1P12882 1939 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 ANKRD34BA5PLL1 514 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 CAPN9O14815 690 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 PGK1P00558 417 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 PAEPP09466 180 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 TFPTP0C1Z6 253 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 CETPP11597 493 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 ANXA13P27216 316 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 HOXD13P35453 343 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 PRKCIP41743 596 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 ACOT2P49753 483 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 TUBA4AP68366 448 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 CLUL1Q15846 466 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 PIGWQ7Z7B1 504 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 PDZD8Q8NEN9 1154 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 BRSK1Q8TDC3 778 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 AFG1LQ8WV93 481 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 GLMNQ92990 594 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 PBKQ96KB5 322 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 ACAP3Q96P50 834 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 POP1Q99575 1024 aaKnown RBP10.41□□□□□ -0.74
NUP50-214ENST00000469163 SPOCK3Q9BQ16 436 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 VPS33BQ9H267 617 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 BLOC1S4Q9NUP1 217 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 SEPT10Q9P0V9 454 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 CFAP69A5D8W1 941 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 SLITRK3O94933 977 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 PGM3O95394 542 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 ZBTB11O95625 1053 aaPredicted RBP10.41□□□□□ -0.74
NUP50-214ENST00000469163 S100A5P33763 92 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 HSD17B3P37058 310 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 PRKCEQ02156 737 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 GFPT1Q06210 699 aaPredicted RBP10.41□□□□□ -0.74
NUP50-214ENST00000469163 ZNF844Q08AG5 666 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 BBS9Q3SYG4 887 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 ZNF658Q5TYW1 1059 aaPredicted RBP10.41□□□□□ -0.74
NUP50-214ENST00000469163 ZNF449Q6P9G9 518 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 SAMD14Q8IZD0 417 aaPredicted RBP10.41□□□□□ -0.74
NUP50-214ENST00000469163 C4orf32Q8N8J7 132 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 CLEC4DQ8WXI8 215 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 NACC1Q96RE7 527 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 ARHGAP39Q9C0H5 1083 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 VTA1Q9NP79 307 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 KMT5AQ9NQR1 393 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 CCDC177Q9NQR7 707 aaPredicted RBP10.41□□□□□ -0.74
NUP50-214ENST00000469163 RBPJLQ9UBG7 517 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 WDR64B1ANS9 1081 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 CHEK2O96017 543 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 FYNP06241 537 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 ACTN1P12814 892 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 GJC1P36383 396 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 PPATQ06203 517 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 NR1I3Q14994 352 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 LRRC74BQ6ZQY2 392 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 OTOP1Q7RTM1 612 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 NPLOC4Q8TAT6 608 aa10.41□□□□□ -0.74
NUP50-214ENST00000469163 ENOX1Q8TC92 643 aaKnown RBP10.41□□□□□ -0.74
NUP50-214ENST00000469163 MGARPQ8TDB4 240 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms