RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 CDC42EP1Q00587 391 aa5.08□□□□□ -1.6
XRN1-206ENST00000467077 TARDBPQ13148 414 aaKnown RBP eCLIP5.08□□□□□ -1.6
XRN1-206ENST00000467077 ADHFE1Q8IWW8 467 aa5.08□□□□□ -1.6
XRN1-206ENST00000467077 PSD4Q8NDX1 1056 aa5.08□□□□□ -1.6
XRN1-206ENST00000467077 DPF2Q92785 391 aa5.08□□□□□ -1.6
XRN1-206ENST00000467077 MACROD1Q9BQ69 325 aa5.08□□□□□ -1.6
XRN1-206ENST00000467077 VKORC1Q9BQB6 163 aa5.08□□□□□ -1.6
XRN1-206ENST00000467077 SMOC2Q9H3U7 446 aa5.08□□□□□ -1.6
XRN1-206ENST00000467077 ADAMTS5Q9UNA0 930 aa5.08□□□□□ -1.6
XRN1-206ENST00000467077 SCAF8Q9UPN6 1271 aaKnown RBP5.08□□□□□ -1.6
XRN1-206ENST00000467077 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.08□□□□□ -1.6
XRN1-206ENST00000467077 POC1B-GALNT4F8VUJ3 575 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 H7C1Q1 480 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 PPM1DO15297 605 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 SMAD6O43541 496 aaKnown RBP5.07□□□□□ -1.6
XRN1-206ENST00000467077 TLR5O60602 858 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 CRYABP02511 175 aaKnown RBP5.07□□□□□ -1.6
XRN1-206ENST00000467077 PDHA1P08559 390 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 CHRM5P08912 532 aaPredicted RBP5.07□□□□□ -1.6
XRN1-206ENST00000467077 CLCN2P51788 898 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 RHDQ02161 417 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 C10orf25Q5T742 122 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 TAF2Q6P1X5 1199 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 GADL1Q6ZQY3 521 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 GALNT4Q8N4A0 578 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.07□□□□□ -1.6
XRN1-206ENST00000467077 SCAMP4Q969E2 229 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 CNPPD1Q9BV87 410 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 CCM2LQ9NUG4 571 aaPredicted RBP5.07□□□□□ -1.6
XRN1-206ENST00000467077 FANCLQ9NW38 375 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 SAP30BPQ9UHR5 308 aaKnown RBP5.07□□□□□ -1.6
XRN1-206ENST00000467077 INTUQ9ULD6 942 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 SH2B3Q9UQQ2 575 aa5.07□□□□□ -1.6
XRN1-206ENST00000467077 SLC16A3O15427 465 aaKnown RBP5.06□□□□□ -1.6
XRN1-206ENST00000467077 PDE8AO60658 829 aa5.06□□□□□ -1.6
XRN1-206ENST00000467077 PDE1AP54750 535 aa5.06□□□□□ -1.6
XRN1-206ENST00000467077 GHRHRQ02643 423 aa5.06□□□□□ -1.6
XRN1-206ENST00000467077 SERPINA13PQ6UXR4 307 aa5.06□□□□□ -1.6
XRN1-206ENST00000467077 RNF180Q86T96 592 aa5.06□□□□□ -1.6
XRN1-206ENST00000467077 IFI44Q8TCB0 444 aa5.06□□□□□ -1.6
XRN1-206ENST00000467077 FSD1LQ9BXM9 530 aa5.06□□□□□ -1.6
XRN1-206ENST00000467077 SERHLQ9NQF3 203 aa5.06□□□□□ -1.6
XRN1-206ENST00000467077 ETAA1Q9NY74 926 aa5.06□□□□□ -1.6
XRN1-206ENST00000467077 PI4KBQ9UBF8 816 aa5.06□□□□□ -1.6
XRN1-206ENST00000467077 MAPRE3Q9UPY8 281 aa5.06□□□□□ -1.6
XRN1-206ENST00000467077 FCHO1O14526 889 aa5.05□□□□□ -1.6
XRN1-206ENST00000467077 CHEK2O96017 543 aa5.05□□□□□ -1.6
XRN1-206ENST00000467077 IL6RP08887 468 aaPredicted RBP5.05□□□□□ -1.6
XRN1-206ENST00000467077 CYP2A6P11509 494 aaPredicted RBP5.05□□□□□ -1.6
XRN1-206ENST00000467077 CHRM3P20309 590 aa5.05□□□□□ -1.6
XRN1-206ENST00000467077 MTNR1BP49286 362 aa5.05□□□□□ -1.6
XRN1-206ENST00000467077 LEXMQ3ZCV2 418 aa5.05□□□□□ -1.6
XRN1-206ENST00000467077 TREML2Q5T2D2 321 aa5.05□□□□□ -1.6
XRN1-206ENST00000467077 UBAP2Q5T6F2 1119 aaKnown RBP5.05□□□□□ -1.6
XRN1-206ENST00000467077 VPS53Q5VIR6 699 aa5.05□□□□□ -1.6
XRN1-206ENST00000467077 PIM3Q86V86 326 aa5.05□□□□□ -1.6
XRN1-206ENST00000467077 FAM109AQ8N4B1 249 aa5.05□□□□□ -1.6
XRN1-206ENST00000467077 NRG4Q8WWG1 115 aa5.05□□□□□ -1.6
XRN1-206ENST00000467077 TTC3P53804 2025 aa5.05□□□□□ -1.6
XRN1-206ENST00000467077 ZNF785A8K8V0 405 aa5.04□□□□□ -1.6
XRN1-206ENST00000467077 GTPBP1O00178 669 aaKnown RBP5.04□□□□□ -1.6
XRN1-206ENST00000467077 GNAI3P08754 354 aa5.04□□□□□ -1.6
XRN1-206ENST00000467077 LPOP22079 712 aaPredicted RBP5.04□□□□□ -1.6
XRN1-206ENST00000467077 KRTAP5-9P26371 169 aa5.04□□□□□ -1.6
XRN1-206ENST00000467077 CDKN2AP42771 156 aaKnown RBP5.04□□□□□ -1.6
XRN1-206ENST00000467077 GNAI1P63096 354 aa5.04□□□□□ -1.6
XRN1-206ENST00000467077 FHL3Q13643 280 aa5.04□□□□□ -1.6
XRN1-206ENST00000467077 RAB39AQ14964 217 aa5.04□□□□□ -1.6
XRN1-206ENST00000467077 ATG9BQ674R7 924 aa5.04□□□□□ -1.6
XRN1-206ENST00000467077 FCRL6Q6DN72 434 aa5.04□□□□□ -1.6
XRN1-206ENST00000467077 MAVSQ7Z434 540 aa5.04□□□□□ -1.6
XRN1-206ENST00000467077 DTX2Q86UW9 622 aa5.04□□□□□ -1.6
XRN1-206ENST00000467077 JAZF1Q86VZ6 243 aa5.04□□□□□ -1.6
XRN1-206ENST00000467077 PDSS2Q86YH6 399 aa5.04□□□□□ -1.6
XRN1-206ENST00000467077 KRTAP4-4Q9BYR3 166 aa5.04□□□□□ -1.6
XRN1-206ENST00000467077 SIK2Q9H0K1 926 aa5.04□□□□□ -1.6
XRN1-206ENST00000467077 CCNL1Q9UK58 526 aaPredicted RBP5.04□□□□□ -1.6
XRN1-206ENST00000467077 EIF4G1Q04637 1599 aaKnown RBP5.04□□□□□ -1.6
XRN1-206ENST00000467077 MYO15BQ96JP2 1530 aa5.03□□□□□ -1.6
XRN1-206ENST00000467077 PSG1P11464 419 aa5.03□□□□□ -1.6
XRN1-206ENST00000467077 LIPAP38571 399 aa5.03□□□□□ -1.6
XRN1-206ENST00000467077 ZNF280AP59817 542 aaPredicted RBP5.03□□□□□ -1.6
XRN1-206ENST00000467077 PSMC1P62191 440 aaKnown RBP5.03□□□□□ -1.6
XRN1-206ENST00000467077 DAB2IPQ5VWQ8 1189 aa5.03□□□□□ -1.6
XRN1-206ENST00000467077 KIRREL2Q6UWL6 708 aa5.03□□□□□ -1.6
XRN1-206ENST00000467077 ZNF813Q6ZN06 617 aa5.03□□□□□ -1.6
XRN1-206ENST00000467077 SLCO5A1Q9H2Y9 848 aa5.03□□□□□ -1.6
XRN1-206ENST00000467077 C14orf119Q9NWQ9 140 aa5.03□□□□□ -1.6
XRN1-206ENST00000467077 GPR45Q9Y5Y3 372 aa5.03□□□□□ -1.6
XRN1-206ENST00000467077 RAD54BQ9Y620 910 aa5.03□□□□□ -1.6
XRN1-206ENST00000467077 MRPL42Q9Y6G3 142 aaKnown RBP5.03□□□□□ -1.6
XRN1-206ENST00000467077 TCF20Q9UGU0 1960 aaKnown RBP5.03□□□□□ -1.6
XRN1-206ENST00000467077 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.02□□□□□ -1.61
XRN1-206ENST00000467077 LACTBL1A8MY62 500 aa5.02□□□□□ -1.61
XRN1-206ENST00000467077 B4DGG1 531 aa5.02□□□□□ -1.61
XRN1-206ENST00000467077 SGTAO43765 313 aa5.02□□□□□ -1.61
XRN1-206ENST00000467077 EXOC3O60645 756 aa5.02□□□□□ -1.61
XRN1-206ENST00000467077 VPS4BO75351 444 aa5.02□□□□□ -1.61
XRN1-206ENST00000467077 CDC45O75419 566 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms