RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 RNF169Q8NCN4 708 aa6.65□□□□□ -1.34
NCL-208ENST00000466274 INPP4AQ96PE3 977 aaPredicted RBP6.65□□□□□ -1.34
NCL-208ENST00000466274 ASPNQ9BXN1 380 aa6.65□□□□□ -1.34
NCL-208ENST00000466274 KRTAP4-11Q9BYQ6 195 aa6.65□□□□□ -1.34
NCL-208ENST00000466274 ARRDC1-AS1Q9H2J1 176 aa6.65□□□□□ -1.34
NCL-208ENST00000466274 PLEKHA4Q9H4M7 779 aa6.65□□□□□ -1.34
NCL-208ENST00000466274 VPS45Q9NRW7 570 aa6.65□□□□□ -1.34
NCL-208ENST00000466274 CDH7Q9ULB5 785 aa6.65□□□□□ -1.34
NCL-208ENST00000466274 NOC2LQ9Y3T9 749 aaKnown RBP6.65□□□□□ -1.34
NCL-208ENST00000466274 GREB1LQ9C091 1923 aaPredicted RBP6.65□□□□□ -1.34
NCL-208ENST00000466274 ATG2AQ2TAZ0 1938 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 NOTOA8MTQ0 251 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 B8ZZF3 427 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 H0Y626 953 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 TRIM16O95361 564 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 EFEMP2O95967 443 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 URODP06132 367 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 GOLGA8HP0CJ92 632 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 CSRP1P21291 193 aaKnown RBP6.64□□□□□ -1.35
NCL-208ENST00000466274 GBP1P32455 592 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 FNTBP49356 437 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 CHRNEQ04844 493 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 RNASELQ05823 741 aaKnown RBP6.64□□□□□ -1.35
NCL-208ENST00000466274 TROAPQ12815 778 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 DUSP4Q13115 394 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 CEP85Q6P2H3 762 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 PARM1Q6UWI2 310 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 CACNA2D4Q7Z3S7 1137 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 ECHDC2Q86YB7 292 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 TMEM57Q8N5G2 664 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 KBTBD3Q8NAB2 608 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 FGF14Q92915 247 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 G6PC3Q9BUM1 346 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 RSRP1Q9BUV0 290 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 PHF20Q9BVI0 1012 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 NT5C3AQ9H0P0 336 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 SLC32A1Q9H598 525 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 ZNF281Q9Y2X9 895 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 BPTFQ12830 3046 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 MYO10Q9HD67 2058 aa6.64□□□□□ -1.35
NCL-208ENST00000466274 CAPN8A6NHC0 703 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 NCANO14594 1321 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 HMMRO75330 724 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 EPN2O95208 641 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 MYH8P13535 1937 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 PDIA4P13667 645 aaKnown RBP6.63□□□□□ -1.35
NCL-208ENST00000466274 NCLP19338 710 aaKnown RBP6.63□□□□□ -1.35
NCL-208ENST00000466274 HOXA5P20719 270 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 RPL10P27635 214 aaKnown RBP6.63□□□□□ -1.35
NCL-208ENST00000466274 HOXA13P31271 388 aaPredicted RBP6.63□□□□□ -1.35
NCL-208ENST00000466274 AK2P54819 239 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 PLCB4Q15147 1175 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 ASPRV1Q53RT3 343 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 CCDC178Q5BJE1 867 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 RRP12Q5JTH9 1297 aaKnown RBP6.63□□□□□ -1.35
NCL-208ENST00000466274 SNAP47Q5SQN1 464 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 MTHFD1LQ6UB35 978 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 DNAJC14Q6Y2X3 702 aaPredicted RBP6.63□□□□□ -1.35
NCL-208ENST00000466274 FTSJ3Q8IY81 847 aaKnown RBP6.63□□□□□ -1.35
NCL-208ENST00000466274 SPEM1Q8N4L4 309 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 ANKS4BQ8N8V4 417 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 IL31RAQ8NI17 732 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 FEZF2Q8TBJ5 459 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 DNASE1L2Q92874 299 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 CRELD1Q96HD1 420 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 RPP25Q9BUL9 199 aaKnown RBP6.63□□□□□ -1.35
NCL-208ENST00000466274 EDEM2Q9BV94 578 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 LMAN1LQ9HAT1 526 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 VAT1LQ9HCJ6 419 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 GCM1Q9NP62 436 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 DACT1Q9NYF0 836 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 RTEL1Q9NZ71 1219 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 ANAPC4Q9UJX5 808 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 NDRG2Q9UN36 371 aaKnown RBP6.63□□□□□ -1.35
NCL-208ENST00000466274 TNNQ9UQP3 1299 aa6.63□□□□□ -1.35
NCL-208ENST00000466274 A0A0U1RQF3 1178 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 TEX51A0A1B0GUA7 166 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 C4orf47A7E2U8 309 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 M0R2C6 588 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 SEMA7AO75326 666 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 RFPL2O75678 378 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 PAPSS2O95340 614 aaPredicted RBP6.62□□□□□ -1.35
NCL-208ENST00000466274 TOP3BO95985 862 aaKnown RBP6.62□□□□□ -1.35
NCL-208ENST00000466274 ALDH2P05091 517 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 SSBP05455 408 aaKnown RBP eCLIP6.62□□□□□ -1.35
NCL-208ENST00000466274 GALTP07902 379 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 KLRC1P26715 233 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 HOXA6P31267 233 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 MPLP40238 635 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 BUD31P41223 144 aaPredicted RBP6.62□□□□□ -1.35
NCL-208ENST00000466274 NT5C2P49902 561 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 SLC26A2P50443 739 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 NMIQ13287 307 aaPredicted RBP6.62□□□□□ -1.35
NCL-208ENST00000466274 LRRC32Q14392 662 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 CCDC6Q16204 474 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 CLLU1OSQ5K130 101 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 ZKSCAN2Q63HK3 967 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 C1orf228Q6PIY5 440 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 GLB1LQ6UWU2 654 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 PLPPR4Q7Z2D5 763 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms