RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 TIMM13Q9Y5L4 95 aaPredicted RBP19.76■□□□□ 0.75
CAPN3-209ENST00000466222 GOLGA8KD6RF30 607 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 OPA1O60313 960 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 B3GAT3O94766 335 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 P4HA1P13674 534 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 NAP1L1P55209 391 aaKnown RBP19.76■□□□□ 0.75
CAPN3-209ENST00000466222 CDR2Q01850 454 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 IKBKEQ14164 716 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 IFI16Q16666 785 aaKnown RBP19.76■□□□□ 0.75
CAPN3-209ENST00000466222 ALS2CLQ60I27 953 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 CD300LGQ6UXG3 332 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 SLC4A11Q8NBS3 891 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 KBTBD7Q8WVZ9 684 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 ELAC1Q9H777 363 aaKnown RBP19.76■□□□□ 0.75
CAPN3-209ENST00000466222 INPPL1O15357 1258 aa19.75■□□□□ 0.75
CAPN3-209ENST00000466222 THAP12O43422 761 aa19.75■□□□□ 0.75
CAPN3-209ENST00000466222 ZMYND10O75800 440 aa19.75■□□□□ 0.75
CAPN3-209ENST00000466222 LMO2P25791 158 aa19.75■□□□□ 0.75
CAPN3-209ENST00000466222 GGCXP38435 758 aa19.75■□□□□ 0.75
CAPN3-209ENST00000466222 TUSC3Q13454 348 aa19.75■□□□□ 0.75
CAPN3-209ENST00000466222 CNKSR3Q6P9H4 555 aa19.75■□□□□ 0.75
CAPN3-209ENST00000466222 FMNL3Q8IVF7 1028 aa19.75■□□□□ 0.75
CAPN3-209ENST00000466222 IFT20Q8IY31 132 aa19.75■□□□□ 0.75
CAPN3-209ENST00000466222 TET1Q8NFU7 2136 aa19.75■□□□□ 0.75
CAPN3-209ENST00000466222 ZNF560Q96MR9 790 aa19.75■□□□□ 0.75
CAPN3-209ENST00000466222 CYP3A43Q9HB55 503 aa19.75■□□□□ 0.75
CAPN3-209ENST00000466222 GDAP2Q9NXN4 497 aa19.75■□□□□ 0.75
CAPN3-209ENST00000466222 LRFN2Q9ULH4 789 aa19.75■□□□□ 0.75
CAPN3-209ENST00000466222 BUB1O43683 1085 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 PDGFRBP09619 1106 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 BRCC3P46736 316 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 RNASELQ05823 741 aaKnown RBP19.74■□□□□ 0.75
CAPN3-209ENST00000466222 MEI1Q5TIA1 1274 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 FAM117BQ6P1L5 589 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 SND1Q7KZF4 910 aaKnown RBP eCLIP19.74■□□□□ 0.75
CAPN3-209ENST00000466222 C16orf59Q7L2K0 433 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 C12orf29Q8N999 325 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 ZNF606Q8WXB4 792 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 DPEP3Q9H4B8 488 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 DMGDHQ9UI17 866 aaKnown RBP19.74■□□□□ 0.75
CAPN3-209ENST00000466222 BARX2Q9UMQ3 279 aaPredicted RBP19.74■□□□□ 0.75
CAPN3-209ENST00000466222 LAMA3Q16787 3333 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 AGPSO00116 658 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 CYB561D2O14569 222 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 KIF4AO95239 1232 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 SYN1P17600 705 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 PBX3P40426 434 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 PNPLA4P41247 253 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 DEFB103AP81534 67 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 CCDC142Q17RM4 750 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 SV2CQ496J9 727 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 TIGD5Q53EQ6 642 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 WSCD1Q658N2 575 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 DPH6Q7L8W6 267 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 OTOP2Q7RTS6 562 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 VPS36Q86VN1 386 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 C7orf61Q8IZ16 206 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 ABI1Q8IZP0 508 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 OR6B3Q8NGW1 331 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 FAM76AQ8TAV0 307 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 CYFIP2Q96F07 1278 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 SENP8Q96LD8 212 aa19.74■□□□□ 0.75
CAPN3-209ENST00000466222 CHORDC1Q9UHD1 332 aaPredicted RBP19.74■□□□□ 0.75
CAPN3-209ENST00000466222 NCK2O43639 380 aa19.73■□□□□ 0.75
CAPN3-209ENST00000466222 PALMO75781 387 aa19.73■□□□□ 0.75
CAPN3-209ENST00000466222 CD19P15391 556 aa19.73■□□□□ 0.75
CAPN3-209ENST00000466222 DSC1Q08554 894 aa19.73■□□□□ 0.75
CAPN3-209ENST00000466222 INCA1Q0VD86 236 aa19.73■□□□□ 0.75
CAPN3-209ENST00000466222 C2CD6Q53TS8 623 aa19.73■□□□□ 0.75
CAPN3-209ENST00000466222 COL13A1Q5TAT6 717 aaPredicted RBP19.73■□□□□ 0.75
CAPN3-209ENST00000466222 GSPT2Q8IYD1 628 aaKnown RBP19.73■□□□□ 0.75
CAPN3-209ENST00000466222 COLGALT2Q8IYK4 626 aa19.73■□□□□ 0.75
CAPN3-209ENST00000466222 URGCPQ8TCY9 931 aa19.73■□□□□ 0.75
CAPN3-209ENST00000466222 CPA5Q8WXQ8 436 aa19.73■□□□□ 0.75
CAPN3-209ENST00000466222 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.73■□□□□ 0.75
CAPN3-209ENST00000466222 BADQ92934 168 aa19.73■□□□□ 0.75
CAPN3-209ENST00000466222 TMEM176AQ96HP8 235 aa19.73■□□□□ 0.75
CAPN3-209ENST00000466222 FAXDC2Q96IV6 333 aa19.73■□□□□ 0.75
CAPN3-209ENST00000466222 SH3GL2Q99962 352 aa19.73■□□□□ 0.75
CAPN3-209ENST00000466222 PRG3Q9Y2Y8 225 aaPredicted RBP19.73■□□□□ 0.75
CAPN3-209ENST00000466222 A6NNZ2 444 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 TBKBP1A7MCY6 615 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 RPL9P32969 192 aaKnown RBP19.72■□□□□ 0.75
CAPN3-209ENST00000466222 OR1G1P47890 313 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 BPIFB4P59827 614 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 TUBB8Q3ZCM7 444 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 LIMS2Q7Z4I7 341 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 ACOT1Q86TX2 421 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 OSTM1Q86WC4 334 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 TMEM199Q8N511 208 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 APPL2Q8NEU8 664 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 HEXIM2Q96MH2 286 aaKnown RBP19.72■□□□□ 0.75
CAPN3-209ENST00000466222 GDF3Q9NR23 364 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 SCN5AQ14524 2016 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 SHOX2O60902 331 aaPredicted RBP19.72■□□□□ 0.75
CAPN3-209ENST00000466222 HUS1O60921 280 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 ABCB4P21439 1286 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 RFC2P35250 354 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 ADGRF2Q8IZF7 708 aa19.72■□□□□ 0.75
CAPN3-209ENST00000466222 EIF1ADQ8N9N8 165 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms