RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 FPR2P25090 351 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 CNR2P34972 360 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 SREBF1P36956 1147 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 NEK4P51957 841 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 MRPL12P52815 198 aaKnown RBP5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 SSRP1Q08945 709 aaKnown RBP5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 TRAF1Q13077 416 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 DGKDQ16760 1214 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 KIAA0753Q2KHM9 967 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 FAM47CQ5HY64 1035 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 TMEM240Q5SV17 173 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 MFSD5Q6N075 450 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 ETV3LQ6ZN32 361 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 DBX2Q6ZNG2 339 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 GGNQ86UU5 652 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 ZNF761Q86XN6 746 aaPredicted RBP5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 CCDC103Q8IW40 242 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 FAM26EQ8N5C1 309 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 ZNF713Q8N859 430 aaPredicted RBP5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 NSUN7Q8NE18 718 aaKnown RBP5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 LENG9Q96B70 501 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 MPHOSPH6Q99547 160 aaKnown RBP5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 GPR20Q99678 358 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 MXRA8Q9BRK3 442 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 C11orf84Q9BUA3 381 aaPredicted RBP5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 RNPEPQ9H4A4 650 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 KCNH7Q9NS40 1196 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 MROH7Q68CQ1 1323 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 MYO9BQ13459 2157 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 CCDC196A0A1B0GTZ2 297 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 GRXCR1A8MXD5 290 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 ZEB2O60315 1214 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 PPFIA4O75335 1185 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 STAM2O75886 525 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 ITGAVP06756 1048 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 CYP3A4P08684 503 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 HOXC8P31273 242 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 TCF7P36402 384 aaPredicted RBP5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 ADAM17P78536 824 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 RBM10P98175 930 aaKnown RBP5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 FPGSQ05932 587 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 MTMR1Q13613 665 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 TRIM71Q2Q1W2 868 aaKnown RBP5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 LRIT3Q3SXY7 679 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 SPATS1Q496A3 300 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 CEP55Q53EZ4 464 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 UTP14CQ5TAP6 766 aaKnown RBP5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 LARP1BQ659C4 914 aaKnown RBP5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 NFRKBQ6P4R8 1299 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 METTL7BQ6UX53 244 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 ZNF365Q70YC5 407 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 MIB1Q86YT6 1006 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 FAM178BQ8IXR5 827 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 KREMEN2Q8NCW0 462 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 ADAMTS17Q8TE56 1095 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 SEC14L1Q92503 715 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 GTF3C6Q969F1 213 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 LBHD1Q9BQE6 289 aaPredicted RBP5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 SENP7Q9BQF6 1050 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 PHF20Q9BVI0 1012 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 SLKQ9H2G2 1235 aaPredicted RBP5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 HIPK3Q9H422 1215 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 MLXIPQ9HAP2 919 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 AGO4Q9HCK5 861 aaKnown RBP5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 JADE2Q9NQC1 790 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 SETD4Q9NVD3 440 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 ACTR10Q9NZ32 417 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 TIMM13Q9Y5L4 95 aaPredicted RBP5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 ARID2Q68CP9 1835 aa5.44□□□□□ -1.54
EXOSC3-204ENST00000465860 VCANP13611 3396 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 ATG2AQ2TAZ0 1938 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 A0A1W2PPC1 479 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 DDX39AO00148 427 aaKnown RBP5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 CPLX1O14810 134 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 MSH4O15457 936 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 SLC37A4O43826 429 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 KPNA6O60684 536 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 DEXIO95424 95 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 TDP2O95551 362 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 FOSP01100 380 aaPredicted RBP5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 SMIM10L2AP0DMW4 78 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 SMIM10L2BP0DMW5 78 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 MARK3P27448 753 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 HOXC12P31275 282 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 THBS2P35442 1172 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 ECI1P42126 302 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 SLC6A11P48066 632 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 RBM25P49756 843 aaKnown RBP5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 NLRP5P59047 1200 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 ACTR2P61160 394 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 RPL11P62913 178 aaKnown RBP5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 NEDD9Q14511 834 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 SF1Q15637 639 aaKnown RBP5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 PTGISQ16647 500 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 SV2CQ496J9 727 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 MARCH8Q5T0T0 291 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 ZNF618Q5T7W0 954 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 E4F1Q66K89 784 aaPredicted RBP5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 IQCEQ6IPM2 695 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms