RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 TK2O00142 265 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 TRDMT1O14717 391 aaKnown RBP10.58□□□□□ -0.72
USP39-212ENST00000465514 SYN3O14994 580 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 PRPHP41219 470 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 RAD51AP2Q09MP3 1159 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 STRN3Q13033 797 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 MRPL58Q14197 206 aaKnown RBP10.58□□□□□ -0.72
USP39-212ENST00000465514 PTPAQ15257 358 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 ZRSR1Q15695 479 aaKnown RBP10.58□□□□□ -0.72
USP39-212ENST00000465514 SLC10A6Q3KNW5 377 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 CTXN3Q4LDR2 81 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 SEZ6Q53EL9 994 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 NAIF1Q69YI7 327 aaPredicted RBP10.58□□□□□ -0.72
USP39-212ENST00000465514 ARMCX6Q7L4S7 300 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 ZNF605Q86T29 641 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 PNPLA1Q8N8W4 532 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 BPIFB1Q8TDL5 484 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 NTPCRQ9BSD7 190 aaKnown RBP10.58□□□□□ -0.72
USP39-212ENST00000465514 GTPBP2Q9BX10 602 aaKnown RBP10.58□□□□□ -0.72
USP39-212ENST00000465514 FBRSL1Q9HCM7 1045 aaKnown RBP10.58□□□□□ -0.72
USP39-212ENST00000465514 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.58□□□□□ -0.72
USP39-212ENST00000465514 TMEM74BQ9NUR3 256 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 OBP2AQ9NY56 170 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 CNTN3Q9P232 1028 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 AFF4Q9UHB7 1163 aaKnown RBP10.58□□□□□ -0.72
USP39-212ENST00000465514 NUB1Q9Y5A7 615 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 TOM1L1O75674 476 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 FTH1P19P0C7X4 201 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 PLS3P13797 630 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 GUCY2CP25092 1073 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 MCM2P49736 904 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 NOLC1Q14978 699 aaKnown RBP eCLIP10.57□□□□□ -0.72
USP39-212ENST00000465514 GPR158Q5T848 1215 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 MCTP1Q6DN14 999 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 RNF19BQ6ZMZ0 732 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 GAREM2Q75VX8 874 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 TMEM161BQ8NDZ6 487 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 TSTD1Q8NFU3 115 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 SPIRE2Q8WWL2 714 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 ADAMTS14Q8WXS8 1223 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 ACDQ96AP0 544 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 SUSD3Q96L08 255 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 TBC1D32Q96NH3 1257 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 CAMK1GQ96NX5 476 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 PNMA5Q96PV4 448 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 PLIN2Q99541 437 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 TIPINQ9BVW5 301 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 SMG9Q9H0W8 520 aaKnown RBP10.57□□□□□ -0.72
USP39-212ENST00000465514 DNAJC25Q9H1X3 360 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 HPS4Q9NQG7 708 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 GKN1Q9NS71 199 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 ANK1P16157 1881 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 MGAQ8IWI9 3026 aa10.57□□□□□ -0.72
USP39-212ENST00000465514 USP9XQ93008 2570 aaPredicted RBP10.57□□□□□ -0.72
USP39-212ENST00000465514 COL12A1Q99715 3063 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 COL6A6A6NMZ7 2263 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 ATXN7O15265 892 aaPredicted RBP10.56□□□□□ -0.72
USP39-212ENST00000465514 CFIP05156 583 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 MAPTP10636 758 aaKnown RBP10.56□□□□□ -0.72
USP39-212ENST00000465514 CPB1P15086 417 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 DRD1P21728 446 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 MARCKSP29966 332 aaPredicted RBP10.56□□□□□ -0.72
USP39-212ENST00000465514 MCM4P33991 863 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 PTGER3P43115 390 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 SMTNP53814 917 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 ATXN3P54252 364 aaPredicted RBP10.56□□□□□ -0.72
USP39-212ENST00000465514 RUNX3Q13761 415 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 HYIQ5T013 277 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 TRIM68Q6AZZ1 485 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 ANO7Q6IWH7 933 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 SLC23A3Q6PIS1 610 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 SYT12Q8IV01 421 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 TMEM130Q8N3G9 435 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 ZNF843Q8N446 348 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 SYT2Q8N9I0 419 aaPredicted RBP10.56□□□□□ -0.72
USP39-212ENST00000465514 APPL2Q8NEU8 664 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 OR2I1PQ8NGU4 316 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 DDX12PQ92771 950 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 EZH1Q92800 747 aaPredicted RBP10.56□□□□□ -0.72
USP39-212ENST00000465514 EBF3Q9H4W6 596 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 THG1LQ9NWX6 298 aaKnown RBP10.56□□□□□ -0.72
USP39-212ENST00000465514 TUBGCP4Q9UGJ1 667 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 KCNG1Q9UIX4 513 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 PCDHB8Q9UN66 801 aa10.56□□□□□ -0.72
USP39-212ENST00000465514 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 NPHP3-ACAD11A0A0J9YXS1 232 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 J3QKU1 62 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 TNFRSF10BO14763 440 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 CLDN3O15551 220 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 OPHN1O60890 802 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 VNN2O95498 520 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 PLA2G4BP0C869 781 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 CXCL8P10145 99 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 CD59P13987 128 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 MATR3P43243 847 aaKnown RBP eCLIP10.55□□□□□ -0.72
USP39-212ENST00000465514 GALK1P51570 392 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 SLC12A3P55017 1021 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 ATP2C1P98194 919 aaPredicted RBP10.55□□□□□ -0.72
USP39-212ENST00000465514 SPAG1Q07617 926 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 MCL1Q07820 350 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms