RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 FAM114A1Q8IWE2 563 aa21.7■■□□□ 1.06
SKA3-205ENST00000465471 FUBP3Q96I24 572 aaKnown RBP eCLIP21.7■■□□□ 1.06
SKA3-205ENST00000465471 DNAJC25Q9H1X3 360 aa21.7■■□□□ 1.06
SKA3-205ENST00000465471 DPEP3Q9H4B8 488 aa21.7■■□□□ 1.06
SKA3-205ENST00000465471 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.7■■□□□ 1.06
SKA3-205ENST00000465471 SLC27A5Q9Y2P5 690 aa21.7■■□□□ 1.06
SKA3-205ENST00000465471 NFE2L3Q9Y4A8 694 aa21.7■■□□□ 1.06
SKA3-205ENST00000465471 PCDHB5Q9Y5E4 795 aa21.7■■□□□ 1.06
SKA3-205ENST00000465471 CLUHO75153 1309 aa21.7■■□□□ 1.06
SKA3-205ENST00000465471 MUC3AQ02505 3323 aa21.69■■□□□ 1.06
SKA3-205ENST00000465471 A8MXQ7 604 aa21.69■■□□□ 1.06
SKA3-205ENST00000465471 LOC730098B7Z3J9 87 aa21.69■■□□□ 1.06
SKA3-205ENST00000465471 CLSTN1O94985 981 aa21.69■■□□□ 1.06
SKA3-205ENST00000465471 HAPLN1P10915 354 aaPredicted RBP21.69■■□□□ 1.06
SKA3-205ENST00000465471 TWF1Q12792 350 aa21.69■■□□□ 1.06
SKA3-205ENST00000465471 PLD1Q13393 1074 aa21.69■■□□□ 1.06
SKA3-205ENST00000465471 MAPRE1Q15691 268 aaKnown RBP21.69■■□□□ 1.06
SKA3-205ENST00000465471 SKOR2Q2VWA4 1001 aaPredicted RBP21.69■■□□□ 1.06
SKA3-205ENST00000465471 WDR44Q5JSH3 913 aa21.69■■□□□ 1.06
SKA3-205ENST00000465471 CDKAL1Q5VV42 579 aa21.69■■□□□ 1.06
SKA3-205ENST00000465471 UNC93AQ86WB7 457 aa21.69■■□□□ 1.06
SKA3-205ENST00000465471 MYCBPAPQ8TBZ2 947 aa21.69■■□□□ 1.06
SKA3-205ENST00000465471 TATDN2Q93075 761 aa21.69■■□□□ 1.06
SKA3-205ENST00000465471 FAM124BQ9H5Z6 455 aaPredicted RBP21.69■■□□□ 1.06
SKA3-205ENST00000465471 AVENQ9NQS1 362 aaPredicted RBP21.69■■□□□ 1.06
SKA3-205ENST00000465471 SAMSN1Q9NSI8 373 aaKnown RBP21.69■■□□□ 1.06
SKA3-205ENST00000465471 ABI2Q9NYB9 513 aaPredicted RBP21.69■■□□□ 1.06
SKA3-205ENST00000465471 CEP72Q9P209 647 aa21.69■■□□□ 1.06
SKA3-205ENST00000465471 DNMT3BQ9UBC3 853 aaKnown RBP21.69■■□□□ 1.06
SKA3-205ENST00000465471 HMGXB4Q9UGU5 601 aa21.69■■□□□ 1.06
SKA3-205ENST00000465471 DOCK8Q8NF50 2099 aa21.68■■□□□ 1.06
SKA3-205ENST00000465471 LETM1O95202 739 aaPredicted RBP21.68■■□□□ 1.06
SKA3-205ENST00000465471 PTPN1P18031 435 aaKnown RBP21.68■■□□□ 1.06
SKA3-205ENST00000465471 ATF6P18850 670 aa21.68■■□□□ 1.06
SKA3-205ENST00000465471 TUFMP49411 452 aaKnown RBP21.68■■□□□ 1.06
SKA3-205ENST00000465471 GRASPQ7Z6J2 395 aaPredicted RBP21.68■■□□□ 1.06
SKA3-205ENST00000465471 B3GALNT2Q8NCR0 500 aa21.68■■□□□ 1.06
SKA3-205ENST00000465471 MYLPFQ96A32 169 aa21.68■■□□□ 1.06
SKA3-205ENST00000465471 NECAB3Q96P71 396 aaPredicted RBP21.68■■□□□ 1.06
SKA3-205ENST00000465471 UHRF1Q96T88 793 aaPredicted RBP21.68■■□□□ 1.06
SKA3-205ENST00000465471 PIDD1Q9HB75 910 aa21.68■■□□□ 1.06
SKA3-205ENST00000465471 HCFC1R1Q9NWW0 138 aa21.68■■□□□ 1.06
SKA3-205ENST00000465471 USTQ9Y2C2 406 aa21.68■■□□□ 1.06
SKA3-205ENST00000465471 CILPO75339 1184 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 SOAT2O75908 522 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 EEF1GP26641 437 aaKnown RBP21.67■■□□□ 1.06
SKA3-205ENST00000465471 MAGEA11P43364 429 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 CDR1P51861 262 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 NDST1P52848 882 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 EPHA5P54756 1037 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 MYL5Q02045 173 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 CETN1Q12798 172 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 MAN2A1Q16706 1144 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 MDH1BQ5I0G3 518 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 MIIPQ5JXC2 388 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 C4orf50Q6ZRC1 276 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 CRYBG2Q8N1P7 616 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 WHAMMQ8TF30 809 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 PCED1BQ96HM7 432 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 TWNKQ96RR1 684 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 SEPT5Q99719 369 aaPredicted RBP21.67■■□□□ 1.06
SKA3-205ENST00000465471 ARID3AQ99856 593 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 BDP1A6H8Y1 2624 aa21.67■■□□□ 1.06
SKA3-205ENST00000465471 GTPBP10A4D1E9 387 aaKnown RBP21.66■■□□□ 1.06
SKA3-205ENST00000465471 KCNJ18B7U540 433 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 MTIF2P46199 727 aaKnown RBP21.66■■□□□ 1.06
SKA3-205ENST00000465471 ALDH1A3P47895 512 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 NTHL1P78549 312 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 CUL2Q13617 745 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 KCNJ12Q14500 433 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 NCAPHQ15003 741 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 MGAT5BQ3V5L5 792 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 ANO6Q4KMQ2 910 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 TCP11X2Q5H9J9 407 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 SPATA2LQ8IUW3 424 aaPredicted RBP21.66■■□□□ 1.06
SKA3-205ENST00000465471 UBR7Q8N806 425 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 EHBP1Q8NDI1 1231 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 TNIP3Q96KP6 325 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 LPIN3Q9BQK8 851 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 BPIFA3Q9BQP9 254 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 LRRC3Q9BY71 257 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 CD320Q9NPF0 282 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 ASB3Q9Y575 518 aa21.66■■□□□ 1.06
SKA3-205ENST00000465471 SYCE3A1L190 88 aa21.65■■□□□ 1.06
SKA3-205ENST00000465471 RHOP08100 348 aa21.65■■□□□ 1.06
SKA3-205ENST00000465471 PTPN2P17706 415 aa21.65■■□□□ 1.06
SKA3-205ENST00000465471 CYP2F1P24903 491 aa21.65■■□□□ 1.06
SKA3-205ENST00000465471 EPHB3P54753 998 aa21.65■■□□□ 1.06
SKA3-205ENST00000465471 PABPC1LQ4VXU2 614 aaKnown RBP21.65■■□□□ 1.06
SKA3-205ENST00000465471 HSP90AA4PQ58FG1 418 aa21.65■■□□□ 1.06
SKA3-205ENST00000465471 PRSS36Q5K4E3 855 aa21.65■■□□□ 1.06
SKA3-205ENST00000465471 TMC8Q8IU68 726 aa21.65■■□□□ 1.06
SKA3-205ENST00000465471 ELMOD1Q8N336 334 aa21.65■■□□□ 1.06
SKA3-205ENST00000465471 TTC39CQ8N584 583 aa21.65■■□□□ 1.06
SKA3-205ENST00000465471 PSMG2Q969U7 264 aa21.65■■□□□ 1.06
SKA3-205ENST00000465471 TUBGCP2Q9BSJ2 902 aa21.65■■□□□ 1.06
SKA3-205ENST00000465471 COL25A1Q9BXS0 654 aaPredicted RBP21.65■■□□□ 1.06
SKA3-205ENST00000465471 HSD3B7Q9H2F3 369 aa21.65■■□□□ 1.06
SKA3-205ENST00000465471 CISHQ9NSE2 258 aa21.65■■□□□ 1.06
SKA3-205ENST00000465471 MAGEC2Q9UBF1 373 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms