RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ALDH1A3P47895 512 aa10.31□□□□□ -0.76
APP-213ENST00000464867 GALK1P51570 392 aa10.31□□□□□ -0.76
APP-213ENST00000464867 RTN1Q16799 776 aa10.31□□□□□ -0.76
APP-213ENST00000464867 SPDYCQ5MJ68 293 aa10.31□□□□□ -0.76
APP-213ENST00000464867 CC2D1AQ6P1N0 951 aaPredicted RBP10.31□□□□□ -0.76
APP-213ENST00000464867 TOGARAM2Q6ZUX3 1019 aa10.31□□□□□ -0.76
APP-213ENST00000464867 TMEFF1Q8IYR6 380 aa10.31□□□□□ -0.76
APP-213ENST00000464867 MINDY1Q8N5J2 469 aa10.31□□□□□ -0.76
APP-213ENST00000464867 GJA10Q969M2 543 aa10.31□□□□□ -0.76
APP-213ENST00000464867 CNOT6LQ96LI5 555 aaKnown RBP10.31□□□□□ -0.76
APP-213ENST00000464867 LRRC3BQ96PB8 259 aa10.31□□□□□ -0.76
APP-213ENST00000464867 ZMYND12Q9H0C1 365 aa10.31□□□□□ -0.76
APP-213ENST00000464867 TMEM74BQ9NUR3 256 aa10.31□□□□□ -0.76
APP-213ENST00000464867 FBXL5Q9UKA1 691 aa10.31□□□□□ -0.76
APP-213ENST00000464867 TAF6LQ9Y6J9 622 aa10.31□□□□□ -0.76
APP-213ENST00000464867 ZNF638Q14966 1978 aaKnown RBP10.31□□□□□ -0.76
APP-213ENST00000464867 PTPN13Q12923 2485 aa10.31□□□□□ -0.76
APP-213ENST00000464867 COL6A6A6NMZ7 2263 aa10.3□□□□□ -0.76
APP-213ENST00000464867 TRABD2BA6NFA1 517 aa10.3□□□□□ -0.76
APP-213ENST00000464867 TBX3O15119 743 aa10.3□□□□□ -0.76
APP-213ENST00000464867 SH3BP5O60239 455 aa10.3□□□□□ -0.76
APP-213ENST00000464867 RECQL4O94761 1208 aa10.3□□□□□ -0.76
APP-213ENST00000464867 CD59P13987 128 aa10.3□□□□□ -0.76
APP-213ENST00000464867 GPC1P35052 558 aa10.3□□□□□ -0.76
APP-213ENST00000464867 BRCC3P46736 316 aa10.3□□□□□ -0.76
APP-213ENST00000464867 PTH1RQ03431 593 aa10.3□□□□□ -0.76
APP-213ENST00000464867 CLN3Q13286 438 aa10.3□□□□□ -0.76
APP-213ENST00000464867 NAB2Q15742 525 aa10.3□□□□□ -0.76
APP-213ENST00000464867 UPP1Q16831 310 aa10.3□□□□□ -0.76
APP-213ENST00000464867 XKR9Q5GH70 373 aa10.3□□□□□ -0.76
APP-213ENST00000464867 STXBP5Q5T5C0 1151 aa10.3□□□□□ -0.76
APP-213ENST00000464867 PPP4R3AQ6IN85 833 aa10.3□□□□□ -0.76
APP-213ENST00000464867 ZNF280DQ6N043 979 aa10.3□□□□□ -0.76
APP-213ENST00000464867 TMPRSS7Q7RTY8 843 aa10.3□□□□□ -0.76
APP-213ENST00000464867 RASSF3Q86WH2 238 aa10.3□□□□□ -0.76
APP-213ENST00000464867 GALNT15Q8N3T1 639 aa10.3□□□□□ -0.76
APP-213ENST00000464867 WHAMMQ8TF30 809 aa10.3□□□□□ -0.76
APP-213ENST00000464867 ZNF592Q92610 1267 aa10.3□□□□□ -0.76
APP-213ENST00000464867 TBC1D32Q96NH3 1257 aa10.3□□□□□ -0.76
APP-213ENST00000464867 CAMK1GQ96NX5 476 aa10.3□□□□□ -0.76
APP-213ENST00000464867 GCNAQ96QF7 691 aa10.3□□□□□ -0.76
APP-213ENST00000464867 ADPGKQ9BRR6 497 aa10.3□□□□□ -0.76
APP-213ENST00000464867 NFKBIZQ9BYH8 718 aa10.3□□□□□ -0.76
APP-213ENST00000464867 EBF3Q9H4W6 596 aa10.3□□□□□ -0.76
APP-213ENST00000464867 KIAA1522Q9P206 1035 aaPredicted RBP10.3□□□□□ -0.76
APP-213ENST00000464867 PILRBQ9UKJ0 227 aa10.3□□□□□ -0.76
APP-213ENST00000464867 NUB1Q9Y5A7 615 aa10.3□□□□□ -0.76
APP-213ENST00000464867 CEP192Q8TEP8 1941 aa10.3□□□□□ -0.76
APP-213ENST00000464867 ARID2Q68CP9 1835 aa10.3□□□□□ -0.76
APP-213ENST00000464867 TNRC6BQ9UPQ9 1833 aaKnown RBP10.3□□□□□ -0.76
APP-213ENST00000464867 TRIP11Q15643 1979 aa10.29□□□□□ -0.76
APP-213ENST00000464867 TEX51A0A1B0GUA7 166 aa10.29□□□□□ -0.76
APP-213ENST00000464867 N4BP3O15049 544 aa10.29□□□□□ -0.76
APP-213ENST00000464867 RRP8O43159 456 aaKnown RBP10.29□□□□□ -0.76
APP-213ENST00000464867 MARCH6O60337 910 aa10.29□□□□□ -0.76
APP-213ENST00000464867 P4HBP07237 508 aaKnown RBP10.29□□□□□ -0.76
APP-213ENST00000464867 WEE1P30291 646 aa10.29□□□□□ -0.76
APP-213ENST00000464867 YWHABP31946 246 aaKnown RBP10.29□□□□□ -0.76
APP-213ENST00000464867 PTGER3P43115 390 aa10.29□□□□□ -0.76
APP-213ENST00000464867 POU4F2Q12837 409 aa10.29□□□□□ -0.76
APP-213ENST00000464867 PFKFB3Q16875 520 aaPredicted RBP10.29□□□□□ -0.76
APP-213ENST00000464867 TSGA10IPQ3SY00 556 aa10.29□□□□□ -0.76
APP-213ENST00000464867 Q4G0T1 1027 aa10.29□□□□□ -0.76
APP-213ENST00000464867 ZNF385CQ66K41 422 aaPredicted RBP10.29□□□□□ -0.76
APP-213ENST00000464867 ITIH5Q86UX2 942 aa10.29□□□□□ -0.76
APP-213ENST00000464867 SGMS1Q86VZ5 419 aa10.29□□□□□ -0.76
APP-213ENST00000464867 NAXDQ8IW45 347 aa10.29□□□□□ -0.76
APP-213ENST00000464867 APPL2Q8NEU8 664 aa10.29□□□□□ -0.76
APP-213ENST00000464867 PRIMPOLQ96LW4 560 aa10.29□□□□□ -0.76
APP-213ENST00000464867 FCRL3Q96P31 734 aaPredicted RBP10.29□□□□□ -0.76
APP-213ENST00000464867 FAM83CQ9BQN1 747 aa10.29□□□□□ -0.76
APP-213ENST00000464867 GRIP2Q9C0E4 1043 aa10.29□□□□□ -0.76
APP-213ENST00000464867 PRORYQ9H606 182 aa10.29□□□□□ -0.76
APP-213ENST00000464867 TASP1Q9H6P5 420 aa10.29□□□□□ -0.76
APP-213ENST00000464867 FBRSL1Q9HCM7 1045 aaKnown RBP10.29□□□□□ -0.76
APP-213ENST00000464867 RAB6BQ9NRW1 208 aa10.29□□□□□ -0.76
APP-213ENST00000464867 PRMT7Q9NVM4 692 aaPredicted RBP10.29□□□□□ -0.76
APP-213ENST00000464867 DNAAF2Q9NVR5 837 aaKnown RBP10.29□□□□□ -0.76
APP-213ENST00000464867 BCCIPQ9P287 314 aaKnown RBP eCLIP10.29□□□□□ -0.76
APP-213ENST00000464867 ZMYM5Q9UJ78 669 aa10.29□□□□□ -0.76
APP-213ENST00000464867 GDAQ9Y2T3 454 aa10.29□□□□□ -0.76
APP-213ENST00000464867 YIPF1Q9Y548 306 aa10.29□□□□□ -0.76
APP-213ENST00000464867 ASB3Q9Y575 518 aa10.29□□□□□ -0.76
APP-213ENST00000464867 ATXN2Q99700 1313 aaKnown RBP10.29□□□□□ -0.76
APP-213ENST00000464867 ZBTB43O43298 467 aa10.28□□□□□ -0.76
APP-213ENST00000464867 AP5Z1O43299 807 aa10.28□□□□□ -0.76
APP-213ENST00000464867 PRAMEF12O95522 483 aa10.28□□□□□ -0.76
APP-213ENST00000464867 ITPKAP23677 461 aa10.28□□□□□ -0.76
APP-213ENST00000464867 GABRR2P28476 465 aa10.28□□□□□ -0.76
APP-213ENST00000464867 MARCKSP29966 332 aaPredicted RBP10.28□□□□□ -0.76
APP-213ENST00000464867 BFSP1Q12934 665 aa10.28□□□□□ -0.76
APP-213ENST00000464867 CAPSQ13938 189 aa10.28□□□□□ -0.76
APP-213ENST00000464867 GLRA4Q5JXX5 417 aa10.28□□□□□ -0.76
APP-213ENST00000464867 GPR155Q7Z3F1 870 aa10.28□□□□□ -0.76
APP-213ENST00000464867 TMC8Q8IU68 726 aa10.28□□□□□ -0.76
APP-213ENST00000464867 CPA6Q8N4T0 437 aa10.28□□□□□ -0.76
APP-213ENST00000464867 MDGA1Q8NFP4 955 aa10.28□□□□□ -0.76
APP-213ENST00000464867 CD101Q93033 1021 aa10.28□□□□□ -0.76
APP-213ENST00000464867 CHFRQ96EP1 664 aa10.28□□□□□ -0.76
APP-213ENST00000464867 CCDC43Q96MW1 224 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms