RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 KLHL36Q8N4N3 616 aa6.11□□□□□ -1.43
CD46-211ENST00000464082 ARHGEF39Q8N4T4 335 aa6.11□□□□□ -1.43
CD46-211ENST00000464082 PPTC7Q8NI37 304 aa6.11□□□□□ -1.43
CD46-211ENST00000464082 RRP36Q96EU6 259 aaKnown RBP6.11□□□□□ -1.43
CD46-211ENST00000464082 ADOQ96SZ5 270 aa6.11□□□□□ -1.43
CD46-211ENST00000464082 LZTS2Q9BRK4 669 aa6.11□□□□□ -1.43
CD46-211ENST00000464082 C16orf70Q9BSU1 422 aa6.11□□□□□ -1.43
CD46-211ENST00000464082 HIPK3Q9H422 1215 aa6.11□□□□□ -1.43
CD46-211ENST00000464082 SLC12A7Q9Y666 1083 aa6.11□□□□□ -1.43
CD46-211ENST00000464082 MRVI1Q9Y6F6 885 aa6.11□□□□□ -1.43
CD46-211ENST00000464082 KLF18A0A0U1RQI7 1052 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 GRXCR1A8MXD5 290 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 B4DLN1 442 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 ZBTB43O43298 467 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 EPB41L2O43491 1005 aaKnown RBP6.1□□□□□ -1.43
CD46-211ENST00000464082 ATP9AO75110 1047 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 CNOT4O95628 575 aaKnown RBP6.1□□□□□ -1.43
CD46-211ENST00000464082 GGPS1O95749 300 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 EPHX1P07099 455 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 KCNA2P16389 499 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 RPS6KB1P23443 525 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 FPR2P25090 351 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 CCND2P30279 289 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 SLC6A11P48066 632 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 MRPL12P52815 198 aaKnown RBP6.1□□□□□ -1.43
CD46-211ENST00000464082 RCAN1P53805 252 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 CCL23P55773 120 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 SMAD3P84022 425 aaKnown RBP6.1□□□□□ -1.43
CD46-211ENST00000464082 RBL2Q08999 1139 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 INF2Q27J81 1249 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 TCTN1Q2MV58 587 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 TRIM71Q2Q1W2 868 aaKnown RBP6.1□□□□□ -1.43
CD46-211ENST00000464082 USP39Q53GS9 565 aaKnown RBP6.1□□□□□ -1.43
CD46-211ENST00000464082 FBXW10Q5XX13 1052 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 HEATR6Q6AI08 1181 aaKnown RBP6.1□□□□□ -1.43
CD46-211ENST00000464082 Q6ZUG5 572 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 ZNF365Q70YC5 407 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 DEFB123Q8N688 67 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 CRYGNQ8WXF5 182 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 HERVK_113Q902F9 699 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 EXTL1Q92935 676 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 SCLYQ96I15 445 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 PGBD1Q96JS3 809 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 RNPC3Q96LT9 517 aaKnown RBP6.1□□□□□ -1.43
CD46-211ENST00000464082 JAKMIP1Q96N16 626 aaKnown RBP6.1□□□□□ -1.43
CD46-211ENST00000464082 CLIC6Q96NY7 704 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 MPHOSPH6Q99547 160 aaKnown RBP6.1□□□□□ -1.43
CD46-211ENST00000464082 YIPF4Q9BSR8 244 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 SPON2Q9BUD6 331 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 SEZ6LQ9BYH1 1024 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 CSRNP2Q9H175 543 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 NGRNQ9NPE2 291 aaKnown RBP6.1□□□□□ -1.43
CD46-211ENST00000464082 IL23AQ9NPF7 189 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 RBM28Q9NW13 759 aaKnown RBP6.1□□□□□ -1.43
CD46-211ENST00000464082 FTSJ1Q9UET6 329 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 PPT2Q9UMR5 302 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 PCDHB10Q9UN67 800 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 ZFR2Q9UPR6 939 aaKnown RBP6.1□□□□□ -1.43
CD46-211ENST00000464082 UBIAD1Q9Y5Z9 338 aa6.1□□□□□ -1.43
CD46-211ENST00000464082 GOLGA8AA7E2F4 631 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 GOLGA8BA8MQT2 603 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 KPNA6O60684 536 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 STAM2O75886 525 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 LGALS2P05162 132 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 IQCF3P0C7M6 154 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 TGFB3P10600 412 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 TRAF1Q13077 416 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 PPIGQ13427 754 aaKnown RBP eCLIP6.09□□□□□ -1.431e-9■□□□□ 8.5
CD46-211ENST00000464082 KRT32Q14532 448 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 DGKDQ16760 1214 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 GNPTABQ3T906 1256 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 BLOC1S2Q6QNY1 142 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 METTL7BQ6UX53 244 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 CYP2W1Q8TAV3 490 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 IL17RAQ96F46 866 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 GBP3Q9H0R5 595 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 PSTPIP2Q9H939 334 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 BARX1Q9HBU1 254 aaPredicted RBP6.09□□□□□ -1.43
CD46-211ENST00000464082 RIC8AQ9NPQ8 531 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 TMEM260Q9NX78 707 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 BARHL2Q9NY43 387 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 HDAC6Q9UBN7 1215 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 PCDHA6Q9UN73 950 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 PCDHA8Q9Y5H6 950 aa6.09□□□□□ -1.43
CD46-211ENST00000464082 PLXNA4Q9HCM2 1894 aa6.09□□□□□ -1.44
CD46-211ENST00000464082 MUC3AQ02505 3323 aa6.08□□□□□ -1.44
CD46-211ENST00000464082 GSTTP1A0A1W2PQM5 241 aa6.08□□□□□ -1.44
CD46-211ENST00000464082 ESYT2A0FGR8 921 aa6.08□□□□□ -1.44
CD46-211ENST00000464082 FIBPO43427 364 aa6.08□□□□□ -1.44
CD46-211ENST00000464082 NBNO60934 754 aa6.08□□□□□ -1.44
CD46-211ENST00000464082 PPFIA4O75335 1185 aa6.08□□□□□ -1.44
CD46-211ENST00000464082 PPM1BO75688 479 aa6.08□□□□□ -1.44
CD46-211ENST00000464082 HMGB1P09429 215 aaKnown RBP6.08□□□□□ -1.44
CD46-211ENST00000464082 CASTP20810 708 aaKnown RBP6.08□□□□□ -1.44
CD46-211ENST00000464082 PDIA3P30101 505 aaKnown RBP6.08□□□□□ -1.44
CD46-211ENST00000464082 NPY5RQ15761 445 aa6.08□□□□□ -1.44
CD46-211ENST00000464082 PTGISQ16647 500 aa6.08□□□□□ -1.44
CD46-211ENST00000464082 PFKFB3Q16875 520 aaPredicted RBP6.08□□□□□ -1.44
CD46-211ENST00000464082 KIAA0753Q2KHM9 967 aa6.08□□□□□ -1.44
CD46-211ENST00000464082 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms