RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 CCDC43Q96MW1 224 aaKnown RBP8.41□□□□□ -1.06
SMC3-202ENST00000462899 PGLYRP2Q96PD5 576 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 BBC3Q96PG8 261 aaPredicted RBP8.41□□□□□ -1.06
SMC3-202ENST00000462899 CCDC94Q9BW85 323 aaPredicted RBP8.41□□□□□ -1.06
SMC3-202ENST00000462899 SLC46A2Q9BY10 475 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 OXCT2Q9BYC2 517 aaPredicted RBP8.41□□□□□ -1.06
SMC3-202ENST00000462899 TMEM60Q9H2L4 133 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 TASP1Q9H6P5 420 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.41□□□□□ -1.06
SMC3-202ENST00000462899 ARHGAP28Q9P2N2 729 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 TUBGCP4Q9UGJ1 667 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 CCL26Q9Y258 94 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 NUB1Q9Y5A7 615 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 ASXL3Q9C0F0 2248 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 SHROOM3Q8TF72 1996 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 MGAQ8IWI9 3026 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 OR6C75A6NL08 312 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 RNF223E7ERA6 249 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 CPLX1O14810 134 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 KHNYNO15037 678 aaKnown RBP8.4□□□□□ -1.06
SMC3-202ENST00000462899 NEMFO60524 1076 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 CDC45O75419 566 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 SOAT2O75908 522 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 CTDNEP1O95476 244 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 MCF2P10911 925 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 LIG1P18858 919 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 DRD1P21728 446 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 RPA1P27694 616 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 YARSP54577 528 aaKnown RBP8.4□□□□□ -1.06
SMC3-202ENST00000462899 EPHB3P54753 998 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 OSTNP61366 133 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 IRX4P78413 519 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 SEMA3BQ13214 749 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 MYBPC2Q14324 1141 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 DMC1Q14565 340 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 ZBTB6Q15916 424 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 TMEM132AQ24JP5 1023 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 SLC10A6Q3KNW5 377 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 ZNF568Q3ZCX4 644 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 FBXO43Q4G163 708 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 DAW1Q8N136 415 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 ATAD1Q8NBU5 361 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 RPLP0P6Q8NHW5 317 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 OLIG1Q8TAK6 271 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 USP13Q92995 863 aaPredicted RBP8.4□□□□□ -1.06
SMC3-202ENST00000462899 NACC1Q96RE7 527 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 LPIN3Q9BQK8 851 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 SMG9Q9H0W8 520 aaKnown RBP8.4□□□□□ -1.06
SMC3-202ENST00000462899 ATXN3LQ9H3M9 355 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 EBF3Q9H4W6 596 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 POLD4Q9HCU8 107 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 GKN1Q9NS71 199 aa8.4□□□□□ -1.06
SMC3-202ENST00000462899 MARCH6O60337 910 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 DTNBO60941 627 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 FDPSP14324 419 aaKnown RBP8.39□□□□□ -1.07
SMC3-202ENST00000462899 ARSAP15289 507 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 TYMPP19971 482 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 MUTP22033 750 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 PSMA5P28066 241 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 CDC25CP30307 473 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 GJA4P35212 333 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 TXKP42681 527 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 ALDH1A3P47895 512 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 GALK1P51570 392 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 MAPK7Q13164 816 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 PTPAQ15257 358 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 ECM1Q16610 540 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 QPCTQ16769 361 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 MPZL3Q6UWV2 235 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 APBB1IPQ7Z5R6 666 aaPredicted RBP8.39□□□□□ -1.07
SMC3-202ENST00000462899 RAB44Q7Z6P3 723 aaPredicted RBP8.39□□□□□ -1.07
SMC3-202ENST00000462899 PDZD3Q86UT5 571 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 C11orf74Q86VG3 221 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 CMTM8Q8IZV2 173 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 OR10T2Q8NGX3 314 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 KIFAP3Q92845 792 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 ACDQ96AP0 544 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 CNOT6LQ96LI5 555 aaKnown RBP8.39□□□□□ -1.07
SMC3-202ENST00000462899 ACAP3Q96P50 834 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 USB1Q9BQ65 265 aaKnown RBP8.39□□□□□ -1.07
SMC3-202ENST00000462899 TARS2Q9BW92 718 aaKnown RBP8.39□□□□□ -1.07
SMC3-202ENST00000462899 CACNA2D2Q9NY47 1150 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 ZMYM5Q9UJ78 669 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 TIMM13Q9Y5L4 95 aaPredicted RBP8.39□□□□□ -1.07
SMC3-202ENST00000462899 URB1O60287 2271 aaKnown RBP8.39□□□□□ -1.07
SMC3-202ENST00000462899 ZNF462Q96JM2 2506 aa8.39□□□□□ -1.07
SMC3-202ENST00000462899 SPAARA0A1B0GVQ0 90 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 TTC26A0AVF1 554 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 ANTXRLA6NF34 631 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 K7ERI5 159 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 PPEF2O14830 753 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 TADA3O75528 432 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 F11P03951 625 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 ADRB2P07550 413 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 HNRNPLP14866 589 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMC3-202ENST00000462899 HMGA1P17096 107 aaKnown RBP8.38□□□□□ -1.07
SMC3-202ENST00000462899 CYP3A5P20815 502 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 U2AF2P26368 475 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMC3-202ENST00000462899 KRT2P35908 639 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 NPTX2P47972 431 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms