RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 PPCSQ9HAB8 311 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 FBXO6Q9NRD1 293 aaPredicted RBP19.4■□□□□ 0.7
HPS3-204ENST00000462030 EXTL3O43909 919 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 CCDC22O60826 627 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 LMNAP02545 664 aaKnown RBP19.4■□□□□ 0.7
HPS3-204ENST00000462030 ITGAVP06756 1048 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 MXRA7P84157 204 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 KPNB1Q14974 876 aaKnown RBP19.4■□□□□ 0.7
HPS3-204ENST00000462030 ACSBG2Q5FVE4 666 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 ADGRD1Q6QNK2 874 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 RHPN2Q8IUC4 686 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 PYROXD1Q8WU10 500 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 UCMAQ8WVF2 138 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 NKD2Q969F2 451 aaPredicted RBP19.4■□□□□ 0.7
HPS3-204ENST00000462030 MANSC1Q9H8J5 431 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 RAVER2Q9HCJ3 691 aaKnown RBP19.4■□□□□ 0.7
HPS3-204ENST00000462030 XPNPEP1Q9NQW7 623 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 TELO2Q9Y4R8 837 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 ZNF541Q9H0D2 1346 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 SIGLEC16A6NMB1 481 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 GSC2O15499 205 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 MMP8P22894 467 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 RPS6P62753 249 aaKnown RBP19.39■□□□□ 0.69
HPS3-204ENST00000462030 DYNLT1P63172 113 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 CCDC6Q16204 474 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 C3orf62Q6ZUJ4 267 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 BANPQ8N9N5 519 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 CPT1BQ92523 772 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 FAM136AQ96C01 138 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 DHRS4Q9BTZ2 278 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 TMOD2Q9NZR1 351 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 STOML1Q9UBI4 398 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 GABBR1Q9UBS5 961 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 NUB1Q9Y5A7 615 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 C2orf71A6NGG8 1288 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 HNRNPCL1O60812 293 aaKnown RBP19.39■□□□□ 0.69
HPS3-204ENST00000462030 SERPINB3P29508 390 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 SFNP31947 248 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 VHLP40337 213 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 CDKN2BP42772 138 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 LIG4P49917 911 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 KRT76Q01546 638 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 TFDP3Q5H9I0 405 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 ATP11CQ8NB49 1132 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 GJD4Q96KN9 370 aaPredicted RBP19.39■□□□□ 0.69
HPS3-204ENST00000462030 TRIM55Q9BYV6 548 aa19.39■□□□□ 0.69
HPS3-204ENST00000462030 METTL5Q9NRN9 209 aaKnown RBP19.39■□□□□ 0.69
HPS3-204ENST00000462030 ZBTB41Q5SVQ8 909 aa19.38■□□□□ 0.69
HPS3-204ENST00000462030 SNX30Q5VWJ9 437 aa19.38■□□□□ 0.69
HPS3-204ENST00000462030 RINLQ6ZS11 566 aa19.38■□□□□ 0.69
HPS3-204ENST00000462030 MCF2L2Q86YR7 1114 aa19.38■□□□□ 0.69
HPS3-204ENST00000462030 FBXO36Q8NEA4 188 aa19.38■□□□□ 0.69
HPS3-204ENST00000462030 SLC35B2Q8TB61 432 aa19.38■□□□□ 0.69
HPS3-204ENST00000462030 DCAKDQ8WVC6 231 aa19.38■□□□□ 0.69
HPS3-204ENST00000462030 TSSK1BQ9BXA7 367 aa19.38■□□□□ 0.69
HPS3-204ENST00000462030 HAPLN2Q9GZV7 340 aa19.38■□□□□ 0.69
HPS3-204ENST00000462030 ACSS3Q9H6R3 686 aa19.38■□□□□ 0.69
HPS3-204ENST00000462030 KCNK13Q9HB14 408 aa19.38■□□□□ 0.69
HPS3-204ENST00000462030 TCRBV7S3A2A0A539 114 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 ABLIM1O14639 778 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 PLSCR1O15162 318 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 PHBP35232 272 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 ARFIP2P53365 341 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 ENPEPQ07075 957 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 DGKZQ13574 1117 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 SLC27A3Q5K4L6 730 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 ZNF606Q8WXB4 792 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 TMEM120AQ9BXJ8 343 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 C17orf75Q9HAS0 396 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 CNTNAP1P78357 1384 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 TM9SF1O15321 606 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 GYG2O15488 501 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 STBD1O95210 358 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 SP100P23497 879 aaPredicted RBP19.37■□□□□ 0.69
HPS3-204ENST00000462030 RXRBP28702 533 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 LBRQ14739 615 aaKnown RBP19.37■□□□□ 0.69
HPS3-204ENST00000462030 SGSM1Q2NKQ1 1148 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 GNPTABQ3T906 1256 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 SEPT12Q8IYM1 358 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 WDR60Q8WVS4 1066 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 FAM151AQ8WW52 585 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 SKA1Q96BD8 255 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 NSL1Q96IY1 281 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 ZBTB45Q96K62 511 aaPredicted RBP19.37■□□□□ 0.69
HPS3-204ENST00000462030 VPS11Q9H270 941 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 DLGAP2Q9P1A6 1054 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 ARHGAP28Q9P2N2 729 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 ZNRF3Q9ULT6 936 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 SNCAIPQ9Y6H5 919 aa19.37■□□□□ 0.69
HPS3-204ENST00000462030 DOCK5Q9H7D0 1870 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 TCRBV5S1A1TA0A578 114 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 SPDYE2BA6NHP3 402 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 YDJCA8MPS7 323 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 NPTXRO95502 500 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 FESP07332 822 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 SPDYE6P0CI01 402 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 RFC5P40937 340 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 ARL4CP56559 192 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 LRRC38Q5VT99 294 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 DNAJC24Q6P3W2 148 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms