RNA–Protein interactions for RNA: ENST00000461379.5

GAPVD1-210, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-210ENST00000461379 CDK11BP21127 795 aaKnown RBP17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 HOXA9P31269 272 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 NDST1P52848 882 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 INCA1Q0VD86 236 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 CUL2Q13617 745 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 IQCB1Q15051 598 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 PUS10Q3MIT2 529 aaKnown RBP17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 GBP6Q6ZN66 633 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 UNC93AQ86WB7 457 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 TTC9BQ8N6N2 239 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 MYCBPAPQ8TBZ2 947 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 C2orf15Q8WU43 125 aaKnown RBP17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 SUSD6Q92537 303 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 ASB2Q96Q27 587 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 CBX8Q9HC52 389 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 ABI2Q9NYB9 513 aaPredicted RBP17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 HSFX1Q9UBD0 423 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 HMGXB4Q9UGU5 601 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 PCDHB5Q9Y5E4 795 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 INSL5Q9Y5Q6 135 aa17.11■□□□□ 0.33
GAPVD1-210ENST00000461379 COL6A3P12111 3177 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 GTPBP10A4D1E9 387 aaKnown RBP17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 BECN2A8MW95 431 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 CILPO75339 1184 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 CAVIN2O95810 425 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 LRG1P02750 347 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 ORC1Q13415 861 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 MAPRE1Q15691 268 aaKnown RBP17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 EXOC3L4Q17RC7 722 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 MDH1BQ5I0G3 518 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 ATAT1Q5SQI0 421 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 ACOT1Q86TX2 421 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 SPATA2LQ8IUW3 424 aaPredicted RBP17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 B3GALNT2Q8NCR0 500 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 ANKRD20A12PQ8NF67 263 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 SPPL2BQ8TCT7 592 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 WHAMMQ8TF30 809 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 SMG7Q92540 1137 aaKnown RBP17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 TNIP3Q96KP6 325 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 VPS16Q9H269 839 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 CISHQ9NSE2 258 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 LIMA1Q9UHB6 759 aaKnown RBP17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 YIPF1Q9Y548 306 aa17.1■□□□□ 0.33
GAPVD1-210ENST00000461379 XYLBO75191 536 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 SOAT2O75908 522 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 TPM2P07951 284 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 ATP1A3P13637 1013 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 SLC9A1P19634 815 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 TBXAS1P24557 533 aaPredicted RBP17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 TUFMP49411 452 aaKnown RBP17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 COPB1P53618 953 aaKnown RBP17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 TWF1Q12792 350 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 SMAD2Q15796 467 aaKnown RBP17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 MGAT5BQ3V5L5 792 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 PHLDB3Q6NSJ2 640 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 TRIM65Q6PJ69 517 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 CYP26C1Q6V0L0 522 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 C4orf50Q6ZRC1 276 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 RRAGAQ7L523 313 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 ARHGEF19Q8IW93 802 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 CRYBG2Q8N1P7 616 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 PPM1KQ8N3J5 372 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 TTC39CQ8N584 583 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 KAT5Q92993 513 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 MYLPFQ96A32 169 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 PCED1BQ96HM7 432 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 RIPOR3Q96MK2 946 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 TWNKQ96RR1 684 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 SEPT5Q99719 369 aaPredicted RBP17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 NT5C1AQ9BXI3 368 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 RHOBTB2Q9BYZ6 727 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 PIDD1Q9HB75 910 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 ABCB6Q9NP58 842 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 FAM50BQ9Y247 325 aa17.09■□□□□ 0.33
GAPVD1-210ENST00000461379 LRRC10BA6NIK2 292 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 POU2F2P09086 479 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 HAPLN1P10915 354 aaPredicted RBP17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 BMP1P13497 986 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 IL9P15248 144 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 CYP2F1P24903 491 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 PON1P27169 355 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 MTHFRP42898 656 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 ALDH1A3P47895 512 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 CYP27A1Q02318 531 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 APBA1Q02410 837 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 CBX2Q14781 532 aaPredicted RBP17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 CFAP221Q4G0U5 840 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 LRSAM1Q6UWE0 723 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 LUZP1Q86V48 1076 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 UBR7Q8N806 425 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 FUBP3Q96I24 572 aaKnown RBP eCLIP17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 B3GNT5Q9BYG0 378 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 ELOVL4Q9GZR5 314 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 FAM124BQ9H5Z6 455 aaPredicted RBP17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 CEP72Q9P209 647 aa17.08■□□□□ 0.32
GAPVD1-210ENST00000461379 BDNFP23560 247 aa17.07■□□□□ 0.32
GAPVD1-210ENST00000461379 EPHB3P54753 998 aa17.07■□□□□ 0.32
GAPVD1-210ENST00000461379 YWHAEP62258 255 aaKnown RBP17.07■□□□□ 0.32
GAPVD1-210ENST00000461379 GCNT1Q02742 428 aa17.07■□□□□ 0.32
GAPVD1-210ENST00000461379 KCNMA1Q12791 1236 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms