RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 SLC37A4O43826 429 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 TDP2O95551 362 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 CYP3A7P24462 503 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 KRT2P35908 639 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 CDK7P50613 346 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 NEK2P51955 445 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 KPNA1P52294 538 aaPredicted RBP9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 JAM2P57087 298 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 CORO7P57737 925 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 PSMC6P62333 389 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 PURAQ00577 322 aaKnown RBP9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 OCRLQ01968 901 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 DUSP4Q13115 394 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 NONOQ15233 471 aaKnown RBP eCLIP9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 GPR19Q15760 415 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 MCTP2Q6DN12 878 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 KCNV1Q6PIU1 500 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 METTL7BQ6UX53 244 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 NIPA1Q7RTP0 329 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 NLRX1Q86UT6 975 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 OSTM1Q86WC4 334 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 PPTC7Q8NI37 304 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 TRMT2BQ96GJ1 504 aaKnown RBP9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 C8orf76Q96K31 380 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 GPR20Q99678 358 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 SMAD5Q99717 465 aaKnown RBP9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 AP5M1Q9H0R1 490 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 ADAMTS10Q9H324 1103 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 DOCK5Q9H7D0 1870 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 OXSMQ9NWU1 459 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 FAN1Q9Y2M0 1017 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 RWDD3Q9Y3V2 267 aa9.01□□□□□ -0.97
ECHDC1-212ENST00000461239 LAMA2P24043 3122 aaKnown RBP9□□□□□ -0.97
ECHDC1-212ENST00000461239 GSTTP1A0A1W2PQM5 241 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 C22orf46C9J442 243 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 MSH4O15457 936 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 MAFGO15525 162 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 CCNE2O96020 404 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 CD8BP10966 210 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 GNAT1P11488 350 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 XBP1P17861 261 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 Q4G0T1 1027 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 HSF5Q4G112 596 aaPredicted RBP9□□□□□ -0.97
ECHDC1-212ENST00000461239 PRR16Q569H4 304 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 FSTL4Q6MZW2 842 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 OTOP3Q7RTS5 596 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 PLA2G4DQ86XP0 818 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 PCSK9Q8NBP7 692 aaKnown RBP9□□□□□ -0.97
ECHDC1-212ENST00000461239 ETNPPLQ8TBG4 499 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 SPATA33Q96N06 139 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 ALPK1Q96QP1 1244 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 PCYT2Q99447 389 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 C16orf70Q9BSU1 422 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 BOCQ9BWV1 1114 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 EPB41L1Q9H4G0 881 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 PDE4DIPQ5VU43 2346 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 NFASCO94856 1347 aa9□□□□□ -0.97
ECHDC1-212ENST00000461239 CEP290O15078 2479 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 SCN10AQ9Y5Y9 1956 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 LAMA3Q16787 3333 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 CCDC194A0A1B0GVG4 234 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 HAS3O00219 553 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 MSTNO14793 375 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 TGM5O43548 720 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 FUCA1P04066 466 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 MYL3P08590 195 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 ZNF286BP0CG31 522 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 COL6A2P12110 1019 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 U2AF2P26368 475 aaKnown RBP eCLIP8.99□□□□□ -0.971e-7■■■■■ 31.5
ECHDC1-212ENST00000461239 CPT1AP50416 773 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 TOB1P50616 345 aaPredicted RBP8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 RTP1P59025 263 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 RBM10P98175 930 aaKnown RBP8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 ZP2Q05996 745 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 NEDD9Q14511 834 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 LETM2Q2VYF4 491 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 TRIM60Q495X7 471 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 MOXD1Q6UVY6 613 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 B3GNT9Q6UX72 402 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 SPRED2Q7Z698 418 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 NEK8Q86SG6 692 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 EFHBQ8N7U6 833 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 FAM184AQ8NB25 1140 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 SH3RF2Q8TEC5 729 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 HAS1Q92839 578 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 ASIC4Q96FT7 647 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 INTS4Q96HW7 963 aaKnown RBP8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 CDHR1Q96JP9 859 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 CTAGE1Q96RT6 745 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 FOXP1Q9H334 677 aaPredicted RBP8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 MLXIPQ9HAP2 919 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 STARD7Q9NQZ5 370 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 SLAMF8Q9P0V8 285 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 TCEAL9Q9UHQ7 104 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 TMEM59LQ9UK28 342 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 SMC3Q9UQE7 1217 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 ELP1O95163 1332 aa8.99□□□□□ -0.97
ECHDC1-212ENST00000461239 IGKV6D-21A0A0A0MT36 114 aa8.98□□□□□ -0.97
ECHDC1-212ENST00000461239 SLC12A8A0AV02 714 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms