RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 CASRP41180 1078 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 DYNC1I2Q13409 638 aaKnown RBP6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 LRRC14Q15048 493 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 DNAJC24Q6P3W2 148 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 STOX1Q6ZVD7 989 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 KLHL23Q8NBE8 558 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 MYCBPAPQ8TBZ2 947 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 LARP4BQ92615 738 aaKnown RBP6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 BBS4Q96RK4 519 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 CYTH2Q99418 400 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 SPOCK3Q9BQ16 436 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 TRIT1Q9H3H1 467 aaKnown RBP6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 KRCC1Q9NPI7 259 aaPredicted RBP6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 BATF3Q9NR55 127 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 ANGPTL2Q9UKU9 493 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 L1RE1Q9UN81 338 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 KRT87PA6NCN2 255 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 PRKAB2O43741 272 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 CALB1P05937 261 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 SYPP08247 313 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 CNPP09543 421 aaKnown RBP6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 CDC27P30260 824 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 CDC25CP30307 473 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 CACNB1Q02641 598 aaPredicted RBP6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 ZNF699Q32M78 642 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 ZNF544Q6NX49 715 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 RFX6Q8HWS3 928 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 UNC45BQ8IWX7 931 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 SH3RF3Q8TEJ3 882 aaPredicted RBP6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 CAPSLQ8WWF8 208 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 CYFIP2Q96F07 1278 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 FGD4Q96M96 766 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 ZIM3Q96PE6 472 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 WDR41Q9HAD4 459 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 SNX12Q9UMY4 172 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 HNRNPCL2B2RXH8 293 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 H7C0C1 242 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 HNRNPCL1O60812 293 aaKnown RBP6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 GCATO75600 419 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 GFPT2O94808 682 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 LMNAP02545 664 aaKnown RBP6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 ALADP13716 330 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 PLCG1P19174 1290 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 LIFRP42702 1097 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 ATP5OP48047 213 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 PMS2P54278 862 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 PTPN11Q06124 597 aaPredicted RBP6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 PDCD2Q16342 344 aaPredicted RBP6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 TSGA10IPQ3SY00 556 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 CYB5R4Q7L1T6 521 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 GMCL1P1Q8NEA9 526 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 DENND1AQ8TEH3 1009 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 KIF12Q96FN5 646 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 GAD1Q99259 594 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 DDX47Q9H0S4 455 aaKnown RBP6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 VCPKMTQ9H867 229 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 ETNK1Q9HBU6 452 aa6.54□□□□□ -1.36
HLA-DQA1-205ENST00000460633 hCG_2014768A0A024R1R8 64 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 TRAV19A0A0A6YYK7 116 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 DYTNA2CJ06 578 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 MAN2B1O00754 1011 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 CCNB2O95067 398 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 AFPP02771 609 aaKnown RBP6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 MYL4P12829 197 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 NR2F2P24468 414 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 PSMA4P25789 261 aaKnown RBP6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 AKT1P31749 480 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 GRIN1Q05586 938 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 GRSF1Q12849 480 aaKnown RBP eCLIP6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 TFDP2Q14188 446 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 XKR4Q5GH76 650 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 C10orf76Q5T2E6 689 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 SLC30A9Q6PML9 568 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 PRR23BQ6ZRT6 265 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 RBM43Q6ZSC3 357 aaKnown RBP6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 SYTL1Q8IYJ3 562 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 ST13P4Q8IZP2 240 aaPredicted RBP6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 TTC30BQ8N4P2 665 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 VGLL2Q8N8G2 317 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 OR2W6PQ8NHA6 318 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 PRMT1Q99873 361 aaKnown RBP6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 FSD1LQ9BXM9 530 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 ANKZF1Q9H8Y5 726 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 COPS7BQ9H9Q2 264 aaPredicted RBP6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 ASAH2Q9NR71 780 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 TUBE1Q9UJT0 475 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 MRPS23Q9Y3D9 190 aaKnown RBP6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 SYNJ2BP-COX16A0A087WUM0 186 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 E5RI56 91 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 CCDC188H7C350 402 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 DNAJC6O75061 913 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 MTA2O94776 668 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 DDNO94850 711 aaPredicted RBP6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 CHGBP05060 677 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 QARSP47897 775 aaKnown RBP6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 VAMP7P51809 220 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 PPP2R5CQ13362 524 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 PTGISQ16647 500 aa6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 AASDHQ4L235 1098 aaPredicted RBP6.53□□□□□ -1.36
HLA-DQA1-205ENST00000460633 C12orf60Q5U649 245 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms