RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 ATXN1LP0C7T5 689 aaKnown RBP7.65□□□□□ -1.18
CKAP2-204ENST00000459902 MCM7P33993 719 aa7.65□□□□□ -1.18
CKAP2-204ENST00000459902 NEK3P51956 506 aa7.65□□□□□ -1.18
CKAP2-204ENST00000459902 WNT3P56703 355 aa7.65□□□□□ -1.18
CKAP2-204ENST00000459902 COL4A3Q01955 1670 aa7.65□□□□□ -1.18
CKAP2-204ENST00000459902 ABHD17BQ5VST6 288 aa7.65□□□□□ -1.18
CKAP2-204ENST00000459902 DCAF12L1Q5VU92 463 aa7.65□□□□□ -1.18
CKAP2-204ENST00000459902 C11orf96Q7Z7L8 435 aa7.65□□□□□ -1.18
CKAP2-204ENST00000459902 VRK3Q8IV63 474 aa7.65□□□□□ -1.18
CKAP2-204ENST00000459902 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.65□□□□□ -1.18
CKAP2-204ENST00000459902 SSH3Q8TE77 659 aa7.65□□□□□ -1.18
CKAP2-204ENST00000459902 PARD3BQ8TEW8 1205 aa7.65□□□□□ -1.18
CKAP2-204ENST00000459902 RAPGEF4Q8WZA2 1011 aa7.65□□□□□ -1.18
CKAP2-204ENST00000459902 STRBPQ96SI9 672 aaKnown RBP7.65□□□□□ -1.18
CKAP2-204ENST00000459902 TESQ9UGI8 421 aaKnown RBP7.65□□□□□ -1.18
CKAP2-204ENST00000459902 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.65□□□□□ -1.18
CKAP2-204ENST00000459902 A0A0B4J269 797 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 PYCARD-AS1I3L0S3 204 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 KPNA5O15131 536 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 TRIAP1O43715 76 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 FZD7O75084 574 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 ADH4P08319 380 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 CYP2C9P11712 490 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 ZXDAP98168 799 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 ABHD18Q0P651 414 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 PICALMQ13492 652 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 TUBB3Q13509 450 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 LAYNQ6UX15 382 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 ZNF627Q7L945 461 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 LNX2Q8N448 690 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 Q96MF0 132 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 OSBPL9Q96SU4 736 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 UNKQ9C0B0 810 aaKnown RBP7.64□□□□□ -1.19
CKAP2-204ENST00000459902 AMBRA1Q9C0C7 1298 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 PAXBP1Q9Y5B6 917 aa7.64□□□□□ -1.19
CKAP2-204ENST00000459902 PLIN1O60240 522 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 SRGNP10124 158 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 XRCC6P12956 609 aaKnown RBP eCLIP7.63□□□□□ -1.19
CKAP2-204ENST00000459902 PXNP49023 591 aaPredicted RBP7.63□□□□□ -1.19
CKAP2-204ENST00000459902 PRIM2P49643 509 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 CASP5P51878 434 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 HNRNPMP52272 730 aaKnown RBP eCLIP7.63□□□□□ -1.19
CKAP2-204ENST00000459902 LOXL3P58215 753 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 ZNF543Q08ER8 600 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 SF3B3Q15393 1217 aaKnown RBP7.63□□□□□ -1.19
CKAP2-204ENST00000459902 RBM20Q5T481 1227 aaKnown RBP7.63□□□□□ -1.19
CKAP2-204ENST00000459902 VPS53Q5VIR6 699 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 ZDHHC24Q6UX98 284 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 GAS2L3Q86XJ1 694 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 ZNF280BQ86YH2 543 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 ULK2Q8IYT8 1036 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 LCORLQ8N3X6 602 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 FAM109AQ8N4B1 249 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 LPIN2Q92539 896 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 CASS4Q9NQ75 786 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 TBC1D30Q9Y2I9 924 aa7.63□□□□□ -1.19
CKAP2-204ENST00000459902 MBD3L4A6NDZ8 208 aaPredicted RBP7.62□□□□□ -1.19
CKAP2-204ENST00000459902 MBD3L3A6NE82 208 aaPredicted RBP7.62□□□□□ -1.19
CKAP2-204ENST00000459902 PPP3CBP16298 524 aa7.62□□□□□ -1.19
CKAP2-204ENST00000459902 CD6P30203 668 aa7.62□□□□□ -1.19
CKAP2-204ENST00000459902 IFIT5Q13325 482 aaKnown RBP7.62□□□□□ -1.19
CKAP2-204ENST00000459902 ZIK1Q3SY52 487 aaPredicted RBP7.62□□□□□ -1.19
CKAP2-204ENST00000459902 PLA1AQ53H76 456 aa7.62□□□□□ -1.19
CKAP2-204ENST00000459902 Q6ZPA2 131 aa7.62□□□□□ -1.19
CKAP2-204ENST00000459902 TSHZ1Q6ZSZ6 1077 aa7.62□□□□□ -1.19
CKAP2-204ENST00000459902 SVIPQ8NHG7 77 aa7.62□□□□□ -1.19
CKAP2-204ENST00000459902 NEU4Q8WWR8 484 aaPredicted RBP7.62□□□□□ -1.19
CKAP2-204ENST00000459902 PTDSS2Q9BVG9 487 aa7.62□□□□□ -1.19
CKAP2-204ENST00000459902 STK31Q9BXU1 1019 aa7.62□□□□□ -1.19
CKAP2-204ENST00000459902 SLC52A1Q9NWF4 448 aa7.62□□□□□ -1.19
CKAP2-204ENST00000459902 PHTF1Q9UMS5 762 aa7.62□□□□□ -1.19
CKAP2-204ENST00000459902 SHOC2Q9UQ13 582 aa7.62□□□□□ -1.19
CKAP2-204ENST00000459902 hCG_1984214I3L0E3 225 aa7.61□□□□□ -1.19
CKAP2-204ENST00000459902 FOXN3O00409 490 aaPredicted RBP7.61□□□□□ -1.19
CKAP2-204ENST00000459902 IL18RAPO95256 599 aa7.61□□□□□ -1.19
CKAP2-204ENST00000459902 IL1R1P14778 569 aa7.61□□□□□ -1.19
CKAP2-204ENST00000459902 KLRC1P26715 233 aa7.61□□□□□ -1.19
CKAP2-204ENST00000459902 HTRA4P83105 476 aaPredicted RBP7.61□□□□□ -1.19
CKAP2-204ENST00000459902 DAG1Q14118 895 aa7.61□□□□□ -1.19
CKAP2-204ENST00000459902 SYCP2LQ5T4T6 812 aa7.61□□□□□ -1.19
CKAP2-204ENST00000459902 VWA1Q6PCB0 445 aa7.61□□□□□ -1.19
CKAP2-204ENST00000459902 SPSB4Q96A44 273 aa7.61□□□□□ -1.19
CKAP2-204ENST00000459902 NELL2Q99435 816 aa7.61□□□□□ -1.19
CKAP2-204ENST00000459902 AIFM2Q9BRQ8 373 aa7.61□□□□□ -1.19
CKAP2-204ENST00000459902 CHST8Q9H2A9 424 aa7.61□□□□□ -1.19
CKAP2-204ENST00000459902 CYP4F11Q9HBI6 524 aa7.61□□□□□ -1.19
CKAP2-204ENST00000459902 PNPLA8Q9NP80 782 aa7.61□□□□□ -1.19
CKAP2-204ENST00000459902 SYBUQ9NX95 663 aa7.61□□□□□ -1.19
CKAP2-204ENST00000459902 KCTD5Q9NXV2 234 aa7.61□□□□□ -1.19
CKAP2-204ENST00000459902 MRPS17Q9Y2R5 130 aaKnown RBP7.61□□□□□ -1.19
CKAP2-204ENST00000459902 LRPAP1P30533 357 aa7.6□□□□□ -1.19
CKAP2-204ENST00000459902 ACVRL1P37023 503 aa7.6□□□□□ -1.19
CKAP2-204ENST00000459902 TM4SF4P48230 202 aa7.6□□□□□ -1.19
CKAP2-204ENST00000459902 ALDH5A1P51649 535 aaPredicted RBP7.6□□□□□ -1.19
CKAP2-204ENST00000459902 BLOC1S1P78537 153 aa7.6□□□□□ -1.19
CKAP2-204ENST00000459902 KRT17Q04695 432 aa7.6□□□□□ -1.19
CKAP2-204ENST00000459902 LONRF1Q17RB8 773 aa7.6□□□□□ -1.19
CKAP2-204ENST00000459902 Q6YL49 198 aa7.6□□□□□ -1.19
CKAP2-204ENST00000459902 B3GALNT2Q8NCR0 500 aa7.6□□□□□ -1.19
CKAP2-204ENST00000459902 BRIP1Q9BX63 1249 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms