RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ATF6P18850 670 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 NDST1P52848 882 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 PPM1LQ5SGD2 360 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 ELMSAN1Q6PJG2 1045 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 APTXQ7Z2E3 356 aaKnown RBP13.69□□□□□ -0.22
COL18A1-206ENST00000459895 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.69□□□□□ -0.22
COL18A1-206ENST00000459895 TCEAL8Q8IYN2 117 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 DCP1BQ8IZD4 617 aaKnown RBP13.69□□□□□ -0.22
COL18A1-206ENST00000459895 PPM1KQ8N3J5 372 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 B3GALNT2Q8NCR0 500 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 STKLD1Q8NE28 680 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 CMASQ8NFW8 434 aaPredicted RBP13.69□□□□□ -0.22
COL18A1-206ENST00000459895 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.69□□□□□ -0.22
COL18A1-206ENST00000459895 HDAC7Q8WUI4 952 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 SEPT5Q99719 369 aaPredicted RBP13.69□□□□□ -0.22
COL18A1-206ENST00000459895 S1PR5Q9H228 398 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 GTF3C4Q9UKN8 822 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 GTPBP10A4D1E9 387 aaKnown RBP13.68□□□□□ -0.22
COL18A1-206ENST00000459895 PES1O00541 588 aaKnown RBP13.68□□□□□ -0.22
COL18A1-206ENST00000459895 PAPLNO95428 1278 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 HOXB8P17481 243 aaPredicted RBP13.68□□□□□ -0.22
COL18A1-206ENST00000459895 HOXA9P31269 272 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 GNL1P36915 607 aaPredicted RBP13.68□□□□□ -0.22
COL18A1-206ENST00000459895 GPR15P49685 360 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 COPB1P53618 953 aaKnown RBP13.68□□□□□ -0.22
COL18A1-206ENST00000459895 CETN1Q12798 172 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 PTCRAQ6ISU1 281 aaPredicted RBP13.68□□□□□ -0.22
COL18A1-206ENST00000459895 GJB7Q6PEY0 223 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 LRSAM1Q6UWE0 723 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 CCDC149Q6ZUS6 474 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 FAM200AQ8TCP9 573 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 WHAMMQ8TF30 809 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 SUSD6Q92537 303 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 PCED1BQ96HM7 432 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 ELOVL4Q9GZR5 314 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 VPS16Q9H269 839 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 CYP3A43Q9HB55 503 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 SIX2Q9NPC8 291 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 CISHQ9NSE2 258 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 FAM49BQ9NUQ9 324 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 HCFC1R1Q9NWW0 138 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 LIMA1Q9UHB6 759 aaKnown RBP13.68□□□□□ -0.22
COL18A1-206ENST00000459895 DPP7Q9UHL4 492 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 SLC27A5Q9Y2P5 690 aa13.68□□□□□ -0.22
COL18A1-206ENST00000459895 NUP210Q8TEM1 1887 aaPredicted RBP13.67□□□□□ -0.22
COL18A1-206ENST00000459895 CLUHO75153 1309 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 HELZP42694 1942 aaKnown RBP13.67□□□□□ -0.22
COL18A1-206ENST00000459895 CCDC195A0A1B0GUA6 201 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 LGALS16A8MUM7 142 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 LRG1P02750 347 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 HNRNPA1P09651 372 aaKnown RBP eCLIP13.67□□□□□ -0.22
COL18A1-206ENST00000459895 CCDC130P13994 396 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 SLC9A1P19634 815 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 TBXAS1P24557 533 aaPredicted RBP13.67□□□□□ -0.22
COL18A1-206ENST00000459895 ELF1P32519 619 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 CACNA2D1P54289 1103 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 CYP27A1Q02318 531 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 ITIH3Q06033 890 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 TWF1Q12792 350 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 DUSP4Q13115 394 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 NFE2Q16621 373 aaPredicted RBP13.67□□□□□ -0.22
COL18A1-206ENST00000459895 EXOC3L4Q17RC7 722 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 MGAT5BQ3V5L5 792 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 PHLDB3Q6NSJ2 640 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 FAM171BQ6P995 826 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 GBP6Q6ZN66 633 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 RRAGAQ7L523 313 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 GPR149Q86SP6 731 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 ACOT1Q86TX2 421 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 FAM35AQ86V20 835 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 SPATA2LQ8IUW3 424 aaPredicted RBP13.67□□□□□ -0.22
COL18A1-206ENST00000459895 EHBP1Q8NDI1 1231 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 MYCBPAPQ8TBZ2 947 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 SPPL2BQ8TCT7 592 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 C2orf15Q8WU43 125 aaKnown RBP13.67□□□□□ -0.22
COL18A1-206ENST00000459895 SMG7Q92540 1137 aaKnown RBP13.67□□□□□ -0.22
COL18A1-206ENST00000459895 FAXDC2Q96IV6 333 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 KREMEN1Q96MU8 473 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 ZNF518BQ9C0D4 1074 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 ADAM7Q9H2U9 754 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 TSPY26PQ9H489 355 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 POMKQ9H5K3 350 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 TMEM30AQ9NV96 361 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 PCDHB5Q9Y5E4 795 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 VCANP13611 3396 aa13.67□□□□□ -0.22
COL18A1-206ENST00000459895 TCF20Q9UGU0 1960 aaKnown RBP13.67□□□□□ -0.22
COL18A1-206ENST00000459895 DENND4CQ5VZ89 1909 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 DOCK6Q96HP0 2047 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 MYH10P35580 1976 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 SMTNL1A8MU46 457 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 BECN2A8MW95 431 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 CLDN5O00501 218 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 POU2F2P09086 479 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 FAM163BP0C2L3 166 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 HAPLN1P10915 354 aaPredicted RBP13.66□□□□□ -0.22
COL18A1-206ENST00000459895 PTPN1P18031 435 aaKnown RBP13.66□□□□□ -0.22
COL18A1-206ENST00000459895 ACO1P21399 889 aaKnown RBP13.66□□□□□ -0.22
COL18A1-206ENST00000459895 PON1P27169 355 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 KLK7P49862 253 aa13.66□□□□□ -0.22
COL18A1-206ENST00000459895 ZNF445P59923 1031 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms