RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 HEMGNQ9BXL5 484 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 PCYOX1Q9UHG3 505 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 UBQLN1Q9UMX0 589 aaKnown RBP17.3■□□□□ 0.36
CAPN13-203ENST00000458085 UTP11Q9Y3A2 253 aaKnown RBP17.3■□□□□ 0.36
CAPN13-203ENST00000458085 PIK3R2O00459 728 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 ALDH1A1P00352 501 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 PFKMP08237 780 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 COILP38432 576 aaPredicted RBP17.3■□□□□ 0.36
CAPN13-203ENST00000458085 PDCLQ13371 301 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 PPP2R5EQ16537 467 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 SOWAHAQ2M3V2 549 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 DUPD1Q68J44 220 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 ACOT1Q86TX2 421 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 EMC1Q8N766 993 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 ATG4AQ8WYN0 398 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 ERP44Q9BS26 406 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 XPNPEP3Q9NQH7 507 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 CHST7Q9NS84 486 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 TSPAN16Q9UKR8 245 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 R3HDM2Q9Y2K5 976 aaKnown RBP17.3■□□□□ 0.36
CAPN13-203ENST00000458085 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.3■□□□□ 0.36
CAPN13-203ENST00000458085 GRIN2DO15399 1336 aa17.29■□□□□ 0.36
CAPN13-203ENST00000458085 PI4K2BG5E9Z4 385 aa17.29■□□□□ 0.36
CAPN13-203ENST00000458085 PIRO00625 290 aa17.29■□□□□ 0.36
CAPN13-203ENST00000458085 CHRNA1P02708 482 aa17.29■□□□□ 0.36
CAPN13-203ENST00000458085 HMGCRP04035 888 aa17.29■□□□□ 0.36
CAPN13-203ENST00000458085 ASGR1P07306 291 aa17.29■□□□□ 0.36
CAPN13-203ENST00000458085 RALAP11233 206 aa17.29■□□□□ 0.36
CAPN13-203ENST00000458085 PRKAR2AP13861 404 aaKnown RBP17.29■□□□□ 0.36
CAPN13-203ENST00000458085 DHX34Q14147 1143 aaKnown RBP17.29■□□□□ 0.36
CAPN13-203ENST00000458085 PPP1R26Q5T8A7 1209 aaPredicted RBP17.29■□□□□ 0.36
CAPN13-203ENST00000458085 CCDC50Q8IVM0 306 aa17.29■□□□□ 0.36
CAPN13-203ENST00000458085 KATNAL2Q8IYT4 538 aa17.29■□□□□ 0.36
CAPN13-203ENST00000458085 LRRC52Q8N7C0 313 aa17.29■□□□□ 0.36
CAPN13-203ENST00000458085 RNF25Q96BH1 459 aaPredicted RBP17.29■□□□□ 0.36
CAPN13-203ENST00000458085 ACSF2Q96CM8 615 aaPredicted RBP17.29■□□□□ 0.36
CAPN13-203ENST00000458085 ZFP42Q96MM3 310 aa17.29■□□□□ 0.36
CAPN13-203ENST00000458085 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.29■□□□□ 0.36
CAPN13-203ENST00000458085 MTUS1Q9ULD2 1270 aa17.29■□□□□ 0.36
CAPN13-203ENST00000458085 FAN1Q9Y2M0 1017 aa17.29■□□□□ 0.36
CAPN13-203ENST00000458085 GOLGA6BA6NDN3 693 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 KRT3P12035 628 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 KCNE1P15382 129 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 IGFBP6P24592 240 aaPredicted RBP17.28■□□□□ 0.36
CAPN13-203ENST00000458085 GPS2Q13227 327 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 NOGQ13253 232 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 KCNA10Q16322 511 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 ZNF618Q5T7W0 954 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 ARFGAP1Q8N6T3 406 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 PIK3R5Q8WYR1 880 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 ACBD3Q9H3P7 528 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 DPEP3Q9H4B8 488 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 SPC25Q9HBM1 224 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 METTL5Q9NRN9 209 aaKnown RBP17.28■□□□□ 0.36
CAPN13-203ENST00000458085 FAM49BQ9NUQ9 324 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 STRIP2Q9ULQ0 834 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 ST3GAL5Q9UNP4 418 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 PTPN22Q9Y2R2 807 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 TRPV2Q9Y5S1 764 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 FAM187AA6NFU0 413 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 SIGLEC16A6NMB1 481 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 TULP2O00295 520 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 FGFR1P11362 822 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 NKX3-2P78367 333 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 SP3Q02447 781 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 ADCY2Q08462 1091 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 NFX1Q12986 1120 aaKnown RBP17.28■□□□□ 0.36
CAPN13-203ENST00000458085 KLF1Q13351 362 aaPredicted RBP17.28■□□□□ 0.36
CAPN13-203ENST00000458085 SNX1Q13596 522 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 LCLAT1Q6UWP7 414 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 SERINC5Q86VE9 423 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 EIF1ADQ8N9N8 165 aaKnown RBP17.28■□□□□ 0.36
CAPN13-203ENST00000458085 C12orf50Q8NA57 414 aaPredicted RBP17.28■□□□□ 0.36
CAPN13-203ENST00000458085 PIWIL1Q96J94 861 aaKnown RBP17.28■□□□□ 0.36
CAPN13-203ENST00000458085 FAM118BQ9BPY3 351 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 PLVAPQ9BX97 442 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 SYNCQ9H7C4 482 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 CACNG4Q9UBN1 327 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 SNX24Q9Y343 169 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 CASP8AP2Q9UKL3 1982 aa17.28■□□□□ 0.36
CAPN13-203ENST00000458085 PTGESO14684 152 aa17.27■□□□□ 0.36
CAPN13-203ENST00000458085 AFF1P51825 1210 aaKnown RBP17.27■□□□□ 0.36
CAPN13-203ENST00000458085 GOLGA7BQ2TAP0 167 aa17.27■□□□□ 0.36
CAPN13-203ENST00000458085 FBXO47Q5MNV8 452 aa17.27■□□□□ 0.36
CAPN13-203ENST00000458085 CCDC105Q8IYK2 499 aa17.27■□□□□ 0.36
CAPN13-203ENST00000458085 KBTBD7Q8WVZ9 684 aa17.27■□□□□ 0.36
CAPN13-203ENST00000458085 ZIM3Q96PE6 472 aa17.27■□□□□ 0.36
CAPN13-203ENST00000458085 SENP6Q9GZR1 1112 aaPredicted RBP17.27■□□□□ 0.36
CAPN13-203ENST00000458085 RAB17Q9H0T7 212 aa17.27■□□□□ 0.36
CAPN13-203ENST00000458085 LRRC19Q9H756 370 aa17.27■□□□□ 0.36
CAPN13-203ENST00000458085 RPS6KA5O75582 802 aa17.27■□□□□ 0.35
CAPN13-203ENST00000458085 GABRB2P47870 512 aa17.27■□□□□ 0.35
CAPN13-203ENST00000458085 TAP1Q03518 808 aa17.27■□□□□ 0.35
CAPN13-203ENST00000458085 CCSAPQ6IQ19 270 aaPredicted RBP17.27■□□□□ 0.35
CAPN13-203ENST00000458085 TTC30AQ86WT1 665 aa17.27■□□□□ 0.35
CAPN13-203ENST00000458085 MREGQ8N565 214 aa17.27■□□□□ 0.35
CAPN13-203ENST00000458085 KLHDC9Q8NEP7 349 aa17.27■□□□□ 0.35
CAPN13-203ENST00000458085 OR6B3Q8NGW1 331 aa17.27■□□□□ 0.35
CAPN13-203ENST00000458085 EXD1Q8NHP7 514 aa17.27■□□□□ 0.35
CAPN13-203ENST00000458085 CAPNS2Q96L46 248 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms