RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 AGO2Q9UKV8 859 aaKnown RBP9.54□□□□□ -0.88
DEPDC1B-202ENST00000453022 TADA3O75528 432 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 F11P03951 625 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 LONP1P36776 959 aaKnown RBP9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 PXNP49023 591 aaPredicted RBP9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 KCNA1Q09470 495 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 CCDC142Q17RM4 750 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 TMEM196Q5HYL7 178 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 NAIF1Q69YI7 327 aaPredicted RBP9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 FSTL4Q6MZW2 842 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 USP49Q70CQ1 688 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 METTL23Q86XA0 190 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 SFR1Q86XK3 245 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 MAB21L3Q8N8X9 362 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 ZSWIM2Q8NEG5 633 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 USP13Q92995 863 aaPredicted RBP9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 FAM84AQ96KN4 292 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 STRA6Q9BX79 667 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 EBF3Q9H4W6 596 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 GKN1Q9NS71 199 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 SPEGQ15772 3267 aa9.53□□□□□ -0.88
DEPDC1B-202ENST00000453022 CNOT1A5YKK6 2376 aaKnown RBP9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 KPNA7A9QM74 516 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 ARSAP15289 507 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 ABCD1P33897 745 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 POU5F1Q01860 360 aaKnown RBP9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 RUNX3Q13761 415 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 SF3A2Q15428 464 aaKnown RBP9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 SF3A1Q15459 793 aaKnown RBP9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 CCDC6Q16204 474 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 SV2CQ496J9 727 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 SDHAF4Q5VUM1 108 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 TXNDC8Q6A555 127 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 SLFN12LQ6IEE8 588 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 CEP68Q76N32 757 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 ZNF720Q7Z2F6 126 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 THEM5Q8N1Q8 247 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 RASSF8Q8NHQ8 419 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 GAB3Q8WWW8 586 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 EPSTI1Q96J88 318 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 PKMYT1Q99640 499 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 FBRSL1Q9HCM7 1045 aaKnown RBP9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 RXFP3Q9NSD7 469 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 POLR3BQ9NW08 1133 aaPredicted RBP9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 THG1LQ9NWX6 298 aaKnown RBP9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 PCDHB5Q9Y5E4 795 aa9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 TNRC6BQ9UPQ9 1833 aaKnown RBP9.52□□□□□ -0.89
DEPDC1B-202ENST00000453022 CHD6Q8TD26 2715 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 TRDMT1O14717 391 aaKnown RBP9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 EGFP01133 1207 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 POLR2BP30876 1174 aaKnown RBP9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 DDIT3P35638 169 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 AVPR1AP37288 418 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 RAP1GAPP47736 663 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 SMARCB1Q12824 385 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 TAF12Q16514 161 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 DYMQ7RTS9 669 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 KBTBD6Q86V97 674 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 DCP1BQ8IZD4 617 aaKnown RBP9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 PDCL2Q8N4E4 241 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 C1orf127Q8N9H9 656 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 CXorf38Q8TB03 319 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 LEO1Q8WVC0 666 aaPredicted RBP9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 POMGNT1Q8WZA1 660 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 EZH1Q92800 747 aaPredicted RBP9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 HVCN1Q96D96 273 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 ZNF560Q96MR9 790 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 SLC22A12Q96S37 553 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 PI4K2AQ9BTU6 479 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 ARRDC1-AS1Q9H2J1 176 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 KIF9Q9HAQ2 790 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 TDP1Q9NUW8 608 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 ZMYM5Q9UJ78 669 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 L1RE1Q9UN81 338 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 SMC3Q9UQE7 1217 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 THADAQ6YHU6 1953 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 CEP295Q9C0D2 2601 aa9.51□□□□□ -0.89
DEPDC1B-202ENST00000453022 MYMKA6NI61 221 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 AXIN1O15169 862 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 HCRTO43612 131 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 RNF40O75150 1001 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 PRPF40AO75400 957 aaKnown RBP9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 RPP40O75818 363 aaKnown RBP9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 EPN2O95208 641 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 IL18RAPO95256 599 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 BMP15O95972 392 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 ITGB3P05106 788 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 ACAT1P24752 427 aaKnown RBP9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 DDX6P26196 483 aaKnown RBP eCLIP9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 CASP5P51878 434 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 TSPY1Q01534 308 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 BFSP1Q12934 665 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 PTPAQ15257 358 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 LARP1BQ659C4 914 aaKnown RBP9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 BRAPQ7Z569 592 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 MON1AQ86VX9 555 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 NT5DC4Q86YG4 428 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 BRSK2Q8IWQ3 736 aa9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 KRI1Q8N9T8 703 aaKnown RBP9.5□□□□□ -0.89
DEPDC1B-202ENST00000453022 DNAJC19Q96DA6 116 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms