RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 USO1O60763 962 aaKnown RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 HEXIM1O94992 359 aaKnown RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 MOCS3O95396 460 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 GCP02774 474 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 PCCAP05165 728 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 ITGAVP06756 1048 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 SNRPB2P08579 225 aaKnown RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 NAT2P11245 290 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 EZRP15311 586 aaKnown RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 PDE6AP16499 860 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 FGFR2P21802 821 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 CCNE1P24864 410 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 CALRP27797 417 aaKnown RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 HOXA7P31268 230 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 KRT2P35908 639 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 LONP1P36776 959 aaKnown RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 HSD17B3P37058 310 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 PPP1R2P41236 205 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 PAFAH1B1P43034 410 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 GJA8P48165 433 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 KLK7P49862 253 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 CCNHP51946 323 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 GTF2A2P52657 109 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 KIF11P52732 1056 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 ZNF143P52747 638 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 CLNS1AP54105 237 aaKnown RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 MAP2K1Q02750 393 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 ZNF844Q08AG5 666 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 LSAMPQ13449 338 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 ITIH4Q14624 930 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 SURF1Q15526 300 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 SKIDA1Q1XH10 827 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 KIAA0753Q2KHM9 967 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 GALNTL6Q49A17 601 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 ACCSLQ4AC99 568 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 CFAP221Q4G0U5 840 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 TNFAIP8L3Q5GJ75 292 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 ERMARDQ5T6L9 678 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 KCTD16Q68DU8 428 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 NAIF1Q69YI7 327 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 C8orf74Q6P047 294 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 NFRKBQ6P4R8 1299 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 KRT26Q7Z3Y9 468 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 RIOX2Q8IUF8 465 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 THEMISQ8N1K5 641 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 KREMEN2Q8NCW0 462 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 TTLL11Q8NHH1 800 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 LRRC15Q8TF66 581 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 BTN2A2Q8WVV5 523 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 TCP11Q8WWU5 503 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 SYN2Q92777 582 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 MTMR8Q96EF0 704 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 CCDC114Q96M63 670 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 ZSWIM3Q96MP5 696 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 ANKRD27Q96NW4 1050 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 ZNF317Q96PQ6 595 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 RUFY1Q96T51 708 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 TUBGCP2Q9BSJ2 902 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 CCSER1Q9C0I3 900 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 BLZF1Q9H2G9 400 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 MAGEF1Q9HAY2 307 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 EPB41L5Q9HCM4 733 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 INCENPQ9NQS7 918 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 SMARCAL1Q9NZC9 954 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 EHD2Q9NZN4 543 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 CORO1CQ9ULV4 474 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 PLAAQ9Y263 795 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 C15orf41Q9Y2V0 281 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 MYH10P35580 1976 aa4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 COL1A1P02452 1464 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P22-202ENST00000451823 ZNF532Q9HCE3 1301 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 SETD1BQ9UPS6 1966 aaKnown RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 ERICH2A1L162 156 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 MACROD2A1Z1Q3 448 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 EME2A4GXA9 379 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 ZSCAN5CA6NGD5 496 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 C9orf118A6NHY6 69 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 B4DLN1 442 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 E7EVH7 732 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 EPHB6O15197 1021 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 NKRFO15226 690 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 TBX1O43435 398 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 RAD51CO43502 376 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 NCK2O43639 380 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 IPO7O95373 1038 aaKnown RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 OAS1P00973 400 aaKnown RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 LRG1P02750 347 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 AMHP03971 560 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 PLEKP08567 350 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 LCP1P13796 627 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 KCNA6P17658 529 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 MAGEA1P43355 309 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 PPP2R2AP63151 447 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 MRPS25P82663 173 aaKnown RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 POU5F1Q01860 360 aaKnown RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 GUCY2DQ02846 1103 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 CUL1Q13616 776 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 BLMHQ13867 455 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 ICAM4Q14773 271 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 WTAPQ15007 396 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms