RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 UNC93AQ86WB7 457 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 TTC9BQ8N6N2 239 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 CCDC150Q8NCX0 1101 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 LMO3Q8TAP4 145 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 MYCBPAPQ8TBZ2 947 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 ENOX1Q8TC92 643 aaKnown RBP15.34■□□□□ 0.05
COL3A1-203ENST00000450867 PGLYRP2Q96PD5 576 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 PI4K2AQ9BTU6 479 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 SNX25Q9H3E2 840 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 MMRN2Q9H8L6 949 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 CEP72Q9P209 647 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 DNMT3BQ9UBC3 853 aaKnown RBP15.34■□□□□ 0.05
COL3A1-203ENST00000450867 GTF3C4Q9UKN8 822 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 NR2E1Q9Y466 385 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 ASB3Q9Y575 518 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 ANAPC1Q9H1A4 1944 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 MYBPHLA2RUH7 354 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 ATP2C2O75185 946 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 CDH8P55286 799 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 KCNH2Q12809 1159 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 CAVIN1Q6NZI2 390 aaKnown RBP15.33■□□□□ 0.04
COL3A1-203ENST00000450867 C4orf50Q6ZRC1 276 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 FAM114A1Q8IWE2 563 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 GJD3Q8N144 294 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 CRYBG2Q8N1P7 616 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 TTC39CQ8N584 583 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 OR6B3Q8NGW1 331 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 ELMO3Q96BJ8 720 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 CEP295NLQ96MC4 621 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 NECAB3Q96P71 396 aaPredicted RBP15.33■□□□□ 0.04
COL3A1-203ENST00000450867 LRRC3Q9BY71 257 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 DNAJC25Q9H1X3 360 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 PIDD1Q9HB75 910 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 CD320Q9NPF0 282 aa15.33■□□□□ 0.04
COL3A1-203ENST00000450867 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.33■□□□□ 0.04
COL3A1-203ENST00000450867 A8MXQ7 604 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 MICAL2O94851 1124 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 AFPP02771 609 aaKnown RBP15.32■□□□□ 0.04
COL3A1-203ENST00000450867 PRKCSHP14314 528 aaPredicted RBP15.32■□□□□ 0.04
COL3A1-203ENST00000450867 PTPN2P17706 415 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 PTPN1P18031 435 aaKnown RBP15.32■□□□□ 0.04
COL3A1-203ENST00000450867 ATF6P18850 670 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 RAP1GAPP47736 663 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 TWF1Q12792 350 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 CCDC142Q17RM4 750 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 VSTM1Q6UX27 236 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 SCARA5Q6ZMJ2 495 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 C11orf57Q6ZUT1 292 aaPredicted RBP15.32■□□□□ 0.04
COL3A1-203ENST00000450867 OTOP3Q7RTS5 596 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 GRASPQ7Z6J2 395 aaPredicted RBP15.32■□□□□ 0.04
COL3A1-203ENST00000450867 ZDHHC14Q8IZN3 488 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 LEMD2Q8NC56 503 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 B3GALNT2Q8NCR0 500 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 PSMG2Q969U7 264 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 HCFC1R1Q9NWW0 138 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.32■□□□□ 0.04
COL3A1-203ENST00000450867 SLC27A5Q9Y2P5 690 aa15.32■□□□□ 0.04
COL3A1-203ENST00000450867 ZFP37Q9Y6Q3 630 aaPredicted RBP15.32■□□□□ 0.04
COL3A1-203ENST00000450867 GTPBP10A4D1E9 387 aaKnown RBP15.31■□□□□ 0.04
COL3A1-203ENST00000450867 C2CD4DB7Z1M9 353 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 CILPO75339 1184 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 RHOP08100 348 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 PDGFRBP09619 1106 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 ALDH1A3P47895 512 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 EPHB3P54753 998 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 PSMC1P62191 440 aaKnown RBP15.31■□□□□ 0.04
COL3A1-203ENST00000450867 TYRO3Q06418 890 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 TPD52L1Q16890 204 aaPredicted RBP15.31■□□□□ 0.04
COL3A1-203ENST00000450867 PABPC1LQ4VXU2 614 aaKnown RBP15.31■□□□□ 0.04
COL3A1-203ENST00000450867 WDR44Q5JSH3 913 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 PRSS36Q5K4E3 855 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 CDKAL1Q5VV42 579 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 SMYD5Q6GMV2 418 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 TMC8Q8IU68 726 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 ELMOD1Q8N336 334 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 PLCD3Q8N3E9 789 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 UBR7Q8N806 425 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 TDRD5Q8NAT2 981 aaKnown RBP15.31■□□□□ 0.04
COL3A1-203ENST00000450867 WHAMMQ8TF30 809 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 MYLPFQ96A32 169 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 PCED1BQ96HM7 432 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 TNIP3Q96KP6 325 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 DPEP3Q9H4B8 488 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 ABI2Q9NYB9 513 aaPredicted RBP15.31■□□□□ 0.04
COL3A1-203ENST00000450867 EPS15L1Q9UBC2 864 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 NFE2L3Q9Y4A8 694 aa15.31■□□□□ 0.04
COL3A1-203ENST00000450867 FSHRP23945 695 aa15.3■□□□□ 0.04
COL3A1-203ENST00000450867 CYP2F1P24903 491 aa15.3■□□□□ 0.04
COL3A1-203ENST00000450867 EEF1GP26641 437 aaKnown RBP15.3■□□□□ 0.04
COL3A1-203ENST00000450867 NDST1P52848 882 aa15.3■□□□□ 0.04
COL3A1-203ENST00000450867 RPL10AP62906 217 aaKnown RBP15.3■□□□□ 0.04
COL3A1-203ENST00000450867 NTHL1P78549 312 aa15.3■□□□□ 0.04
COL3A1-203ENST00000450867 CETN1Q12798 172 aa15.3■□□□□ 0.04
COL3A1-203ENST00000450867 CUL2Q13617 745 aa15.3■□□□□ 0.04
COL3A1-203ENST00000450867 MAN2A1Q16706 1144 aa15.3■□□□□ 0.04
COL3A1-203ENST00000450867 SKOR2Q2VWA4 1001 aaPredicted RBP15.3■□□□□ 0.04
COL3A1-203ENST00000450867 MDH1BQ5I0G3 518 aa15.3■□□□□ 0.04
COL3A1-203ENST00000450867 IQCEQ6IPM2 695 aa15.3■□□□□ 0.04
COL3A1-203ENST00000450867 ITIH5Q86UX2 942 aa15.3■□□□□ 0.04
COL3A1-203ENST00000450867 SPATA2LQ8IUW3 424 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms