RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 TDP1Q9NUW8 608 aa12.52□□□□□ -0.41
COPS7B-213ENST00000449174 ITGA11Q9UKX5 1188 aa12.52□□□□□ -0.41
COPS7B-213ENST00000449174 SRPRBQ9Y5M8 271 aaKnown RBP12.52□□□□□ -0.41
COPS7B-213ENST00000449174 MORC2Q9Y6X9 1032 aaPredicted RBP12.52□□□□□ -0.41
COPS7B-213ENST00000449174 SCN1AP35498 2009 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 VPS37CA5D8V6 355 aaPredicted RBP12.51□□□□□ -0.41
COPS7B-213ENST00000449174 TRDMT1O14717 391 aaKnown RBP12.51□□□□□ -0.41
COPS7B-213ENST00000449174 SLC30A4O14863 429 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 HUS1O60921 280 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 PRPF40AO75400 957 aaKnown RBP12.51□□□□□ -0.41
COPS7B-213ENST00000449174 GCNT3O95395 438 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 F11P03951 625 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 HMGA1P17096 107 aaKnown RBP12.51□□□□□ -0.41
COPS7B-213ENST00000449174 LHX1P48742 406 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 TFAMQ00059 246 aaKnown RBP12.51□□□□□ -0.41
COPS7B-213ENST00000449174 TNK2Q07912 1038 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 LPAL2Q16609 132 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 FBXO43Q4G163 708 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 TMEM196Q5HYL7 178 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 WDR44Q5JSH3 913 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 PRR23CQ6ZRP0 262 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 CEP68Q76N32 757 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 TMEM150AQ86TG1 271 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 MON1AQ86VX9 555 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 GPIHBP1Q8IV16 184 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 SYCP3Q8IZU3 236 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 PDCL2Q8N4E4 241 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 TOP6BLQ8N6T0 577 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 MAB21L3Q8N8X9 362 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 TTC8Q8TAM2 541 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 USP13Q92995 863 aaPredicted RBP12.51□□□□□ -0.41
COPS7B-213ENST00000449174 FUBP3Q96I24 572 aaKnown RBP eCLIP12.51□□□□□ -0.41
COPS7B-213ENST00000449174 MYRFLQ96LU7 910 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 CEP295NLQ96MC4 621 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 TMEM206Q9H813 350 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 GKN1Q9NS71 199 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 GDAP2Q9NXN4 497 aa12.51□□□□□ -0.41
COPS7B-213ENST00000449174 DDX43Q9NXZ2 648 aaKnown RBP12.51□□□□□ -0.41
COPS7B-213ENST00000449174 RBAKQ9NYW8 714 aaPredicted RBP12.51□□□□□ -0.41
COPS7B-213ENST00000449174 FBXO2Q9UK22 296 aaPredicted RBP12.51□□□□□ -0.41
COPS7B-213ENST00000449174 R3HCC1Q9Y3T6 440 aaKnown RBP12.51□□□□□ -0.41
COPS7B-213ENST00000449174 DENND4CQ5VZ89 1909 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 FRMD3A2A2Y4 597 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 MYMKA6NI61 221 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 EXTL3O43909 919 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 AKAP3O75969 853 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 NOL4O94818 638 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 ITGB3P05106 788 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 DRD1P21728 446 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 PCSK1P29120 753 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 POLR2BP30876 1174 aaKnown RBP12.5□□□□□ -0.41
COPS7B-213ENST00000449174 PDE6CP51160 858 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 RBP5P82980 135 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 DMWDQ09019 674 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 CUL4AQ13619 759 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 CFAP221Q4G0U5 840 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 INTS6LQ5JSJ4 861 aaKnown RBP12.5□□□□□ -0.41
COPS7B-213ENST00000449174 STXBP4Q6ZWJ1 553 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 DPH6Q7L8W6 267 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 CAMKK1Q8N5S9 505 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 FAM160A2Q8N612 972 aaPredicted RBP12.5□□□□□ -0.41
COPS7B-213ENST00000449174 C1orf127Q8N9H9 656 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 FSIP1Q8NA03 581 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 CCDC26Q8TAB7 109 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 GAB3Q8WWW8 586 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 DNAJC19Q96DA6 116 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 AGAP1Q9UPQ3 857 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 SLC8A2Q9UPR5 921 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 CLIC4Q9Y696 253 aa12.5□□□□□ -0.41
COPS7B-213ENST00000449174 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.5□□□□□ -0.41
COPS7B-213ENST00000449174 F5P12259 2224 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 OBSL1O75147 1896 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.49□□□□□ -0.41
COPS7B-213ENST00000449174 CENPBP07199 599 aaPredicted RBP12.49□□□□□ -0.41
COPS7B-213ENST00000449174 USP17L7P0C7H9 530 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 PFKLP17858 780 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 FAM160A1Q05DH4 1040 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 KCNA1Q09470 495 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 MYO1EQ12965 1108 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 SURF1Q15526 300 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 TXNDC8Q6A555 127 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 HEATR6Q6AI08 1181 aaKnown RBP12.49□□□□□ -0.41
COPS7B-213ENST00000449174 USP49Q70CQ1 688 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 CACNA2D4Q7Z3S7 1137 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 SPATA2LQ8IUW3 424 aaPredicted RBP12.49□□□□□ -0.41
COPS7B-213ENST00000449174 CPA6Q8N4T0 437 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 CSGALNACT2Q8N6G5 542 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 PI4K2AQ9BTU6 479 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 LRRC27Q9C0I9 530 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 SMG9Q9H0W8 520 aaKnown RBP12.49□□□□□ -0.41
COPS7B-213ENST00000449174 EBF3Q9H4W6 596 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 HPS4Q9NQG7 708 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 TMLHEQ9NVH6 421 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 EHD2Q9NZN4 543 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 L1RE1Q9UN81 338 aa12.49□□□□□ -0.41
COPS7B-213ENST00000449174 MAGED2Q9UNF1 606 aaPredicted RBP12.49□□□□□ -0.41
COPS7B-213ENST00000449174 TRAV19A0A0A6YYK7 116 aa12.48□□□□□ -0.41
COPS7B-213ENST00000449174 DCDC2BA2VCK2 349 aa12.48□□□□□ -0.41
COPS7B-213ENST00000449174 GABRDO14764 452 aa12.48□□□□□ -0.41
COPS7B-213ENST00000449174 RPP40O75818 363 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms