RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 APOBEC3GQ9HC16 384 aaKnown RBP12.74□□□□□ -0.37
RFC4-208ENST00000447345 WDR6Q9NNW5 1121 aaKnown RBP12.74□□□□□ -0.37
RFC4-208ENST00000447345 CRTAC1Q9NQ79 661 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 DNMT3BQ9UBC3 853 aaKnown RBP12.74□□□□□ -0.37
RFC4-208ENST00000447345 HMGXB4Q9UGU5 601 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 NR2E1Q9Y466 385 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 PCDHB5Q9Y5E4 795 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 ANAPC1Q9H1A4 1944 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 C19orf67A6NJJ6 358 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 LOC730098B7Z3J9 87 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 TACC1O75410 805 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 FGFR1OPO95684 399 aaKnown RBP12.73□□□□□ -0.37
RFC4-208ENST00000447345 GNA14O95837 355 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 CCDC192P0DO97 292 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 ATF6P18850 670 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 CD58P19256 250 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 FSHRP23945 695 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 ALDH1A3P47895 512 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 FMO5P49326 533 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 GPR15P49685 360 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 CYP27A1Q02318 531 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 LRMPQ12912 555 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 PLD1Q13393 1074 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 NFE2Q16621 373 aaPredicted RBP12.73□□□□□ -0.37
RFC4-208ENST00000447345 SDHAF4Q5VUM1 108 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 CYP26C1Q6V0L0 522 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 C11orf57Q6ZUT1 292 aaPredicted RBP12.73□□□□□ -0.37
RFC4-208ENST00000447345 SPATA2LQ8IUW3 424 aaPredicted RBP12.73□□□□□ -0.37
RFC4-208ENST00000447345 TRIM59Q8IWR1 403 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 HS6ST3Q8IZP7 471 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 ST13P5Q8NFI4 369 aaPredicted RBP12.73□□□□□ -0.37
RFC4-208ENST00000447345 SPPL2BQ8TCT7 592 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 GIPC2Q8TF65 315 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 PKMYT1Q99640 499 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 NIF3L1Q9GZT8 377 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 DNAJC25Q9H1X3 360 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 RAB20Q9NX57 234 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 CEP72Q9P209 647 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 CDH9Q9ULB4 789 aa12.73□□□□□ -0.37
RFC4-208ENST00000447345 TNFRSF10AO00220 468 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 N4BP1O75113 896 aaKnown RBP12.72□□□□□ -0.37
RFC4-208ENST00000447345 RHOP08100 348 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 MYL4P12829 197 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 PTPN2P17706 415 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 CYP2F1P24903 491 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 NDST1P52848 882 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 EPHB3P54753 998 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 VEPH1Q14D04 833 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 STX1AQ16623 288 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 SLC5A9Q2M3M2 681 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 WDR44Q5JSH3 913 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 IQCEQ6IPM2 695 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 RTL10Q7L3V2 364 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 OTOP3Q7RTS5 596 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 SCN4BQ8IWT1 228 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 ITFG1Q8TB96 612 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 C2orf15Q8WU43 125 aaKnown RBP12.72□□□□□ -0.37
RFC4-208ENST00000447345 KHSRPQ92945 711 aaKnown RBP eCLIP12.72□□□□□ -0.373e-6■■□□□ 13.8
RFC4-208ENST00000447345 ACSF2Q96CM8 615 aaPredicted RBP12.72□□□□□ -0.37
RFC4-208ENST00000447345 PCED1BQ96HM7 432 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 ZNF512Q96ME7 567 aaPredicted RBP12.72□□□□□ -0.37
RFC4-208ENST00000447345 MYADMQ96S97 322 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 ARID3AQ99856 593 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 MUTYHQ9UIF7 546 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 MAFFQ9ULX9 164 aa12.72□□□□□ -0.37
RFC4-208ENST00000447345 MRPS23Q9Y3D9 190 aaKnown RBP12.72□□□□□ -0.37
RFC4-208ENST00000447345 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.72□□□□□ -0.37
RFC4-208ENST00000447345 HELZP42694 1942 aaKnown RBP12.72□□□□□ -0.37
RFC4-208ENST00000447345 PAPLNO95428 1278 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 AFPP02771 609 aaKnown RBP12.71□□□□□ -0.37
RFC4-208ENST00000447345 POU2F2P09086 479 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 HAPLN1P10915 354 aaPredicted RBP12.71□□□□□ -0.37
RFC4-208ENST00000447345 GJA1P17302 382 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 CEBPBP17676 345 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 PTPN1P18031 435 aaKnown RBP12.71□□□□□ -0.37
RFC4-208ENST00000447345 BDNFP23560 247 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 ERCC5P28715 1186 aaPredicted RBP12.71□□□□□ -0.37
RFC4-208ENST00000447345 MTIF2P46199 727 aaKnown RBP12.71□□□□□ -0.37
RFC4-208ENST00000447345 MARSP56192 900 aaKnown RBP12.71□□□□□ -0.37
RFC4-208ENST00000447345 MCCD1P59942 119 aaPredicted RBP12.71□□□□□ -0.37
RFC4-208ENST00000447345 KCNH2Q12809 1159 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 SMARCB1Q12824 385 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 DDR2Q16832 855 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 C4orf50Q6ZRC1 276 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 PDZD4Q76G19 769 aaPredicted RBP12.71□□□□□ -0.37
RFC4-208ENST00000447345 ACOT1Q86TX2 421 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 RNF135Q8IUD6 432 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 B3GALNT2Q8NCR0 500 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 TATDN2Q93075 761 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 TCEAL4Q96EI5 215 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 MED10Q9BTT4 135 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 BCO2Q9BYV7 579 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 ZNF334Q9HCZ1 680 aaPredicted RBP12.71□□□□□ -0.37
RFC4-208ENST00000447345 ASAH2Q9NR71 780 aa12.71□□□□□ -0.37
RFC4-208ENST00000447345 CLDN5O00501 218 aa12.7□□□□□ -0.38
RFC4-208ENST00000447345 NRG2O14511 850 aaPredicted RBP12.7□□□□□ -0.38
RFC4-208ENST00000447345 ASGR2P07307 311 aa12.7□□□□□ -0.38
RFC4-208ENST00000447345 CCDC130P13994 396 aa12.7□□□□□ -0.38
RFC4-208ENST00000447345 CCR2P41597 374 aa12.7□□□□□ -0.38
RFC4-208ENST00000447345 TUFMP49411 452 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms