RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 TRAPPC3O43617 180 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 BEST1O76090 585 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 MICAL2O94851 1124 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 SLC34A2O95436 690 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 SOD2P04179 222 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 CHRNB2P17787 502 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 PTPN1P18031 435 aaKnown RBP8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 BDNFP23560 247 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 TBXAS1P24557 533 aaPredicted RBP8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 CYP2F1P24903 491 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 EIF4A3P38919 411 aaKnown RBP8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 AARSP49588 968 aaKnown RBP eCLIP8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 MCCD1P59942 119 aaPredicted RBP8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 ERVK-21P61565 698 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 ZBED6P86452 979 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 GCNT1Q02742 428 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 KLHL30Q0D2K2 578 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 CAMK1Q14012 370 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 GRIN2CQ14957 1233 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 PTPN14Q15678 1187 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 WDR59Q6PJI9 974 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 ZNF571Q7Z3V5 609 aaPredicted RBP8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 DDX53Q86TM3 631 aaKnown RBP8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 THEM5Q8N1Q8 247 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 B3GALNT2Q8NCR0 500 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 ZNF397Q8NF99 534 aaPredicted RBP8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 SLC30A5Q8TAD4 765 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 GIPC2Q8TF65 315 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 ATRIPQ8WXE1 791 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 SHC3Q92529 594 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 NDRG1Q92597 394 aaKnown RBP8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 TSPAN18Q96SJ8 248 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 PCDHB18PQ96TA0 734 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 SEPT5Q99719 369 aaPredicted RBP8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 DESI2Q9BSY9 194 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 NT5C1AQ9BXI3 368 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 ZBP1Q9H171 429 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 CRISPLD1Q9H336 500 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 TAS2R14Q9NYV8 317 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 TJP2Q9UDY2 1190 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 BARX2Q9UMQ3 279 aaPredicted RBP8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 STXBP5LQ9Y2K9 1186 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 TSC2P49815 1807 aa8.04□□□□□ -1.12
SF3A3P1-201ENST00000446317 COL4A4P53420 1690 aaPredicted RBP8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 WDR27A2RRH5 827 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 TMEM189-UBE2V1I3L0A0 370 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 TEX28O15482 410 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 LINC01565O15544 149 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 ATMINO43313 823 aaPredicted RBP8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 GJB6O95452 261 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 SEC24AO95486 1093 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 VNN2O95498 520 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 STAU1O95793 577 aaKnown RBP8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 CNPP09543 421 aaKnown RBP8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 CYP11B1P15538 503 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 KLRC2P26717 231 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 PPM1AP35813 382 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 PDE6CP51160 858 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 MAP3K7CLP57077 242 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 PTK2Q05397 1052 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 GFPT1Q06210 699 aaPredicted RBP8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 CCDC85BQ15834 202 aaPredicted RBP8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 DDR2Q16832 855 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 INTS6LQ5JSJ4 861 aaKnown RBP8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 CYP4A22Q5TCH4 519 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 NAA35Q5VZE5 725 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 ZNF280DQ6N043 979 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 IRF2BP2Q7Z5L9 587 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 FAM71AQ8IYT1 594 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 C17orf53Q8N3J3 647 aaPredicted RBP8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 C1orf131Q8NDD1 294 aaKnown RBP8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 CPA5Q8WXQ8 436 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 CYFIP2Q96F07 1278 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 PCED1BQ96HM7 432 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 KCNK16Q96T55 309 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 CLSTN3Q9BQT9 956 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 NUP58Q9BVL2 599 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 KCNF1Q9H3M0 494 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 ZNF576Q9H609 170 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 VRTNQ9H8Y1 702 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 CYP3A43Q9HB55 503 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 TLR9Q9NR96 1032 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 MRPL17Q9NRX2 175 aaKnown RBP8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 KRT82Q9NSB4 513 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 TMEM30AQ9NV96 361 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 ARHGAP20Q9P2F6 1191 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 CDH22Q9UJ99 828 aa8.03□□□□□ -1.12
SF3A3P1-201ENST00000446317 REV3LO60673 3130 aa8.02□□□□□ -1.13
SF3A3P1-201ENST00000446317 CDH23Q9H251 3354 aa8.02□□□□□ -1.13
SF3A3P1-201ENST00000446317 H3BNC9 293 aa8.02□□□□□ -1.13
SF3A3P1-201ENST00000446317 GABRDO14764 452 aa8.02□□□□□ -1.13
SF3A3P1-201ENST00000446317 TACC1O75410 805 aa8.02□□□□□ -1.13
SF3A3P1-201ENST00000446317 AP1G2O75843 785 aa8.02□□□□□ -1.13
SF3A3P1-201ENST00000446317 CYP11A1P05108 521 aa8.02□□□□□ -1.13
SF3A3P1-201ENST00000446317 LCP1P13796 627 aa8.02□□□□□ -1.13
SF3A3P1-201ENST00000446317 EPCAMP16422 314 aa8.02□□□□□ -1.13
SF3A3P1-201ENST00000446317 FERP16591 822 aa8.02□□□□□ -1.13
SF3A3P1-201ENST00000446317 TYMPP19971 482 aa8.02□□□□□ -1.13
SF3A3P1-201ENST00000446317 TNFAIP3P21580 790 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms