RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 ATP4AP20648 1035 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 DCTN2Q13561 401 aaKnown RBP19.4■□□□□ 0.7
SHANK3-203ENST00000445220 ATP1A4Q13733 1029 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 LRRC6Q86X45 466 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 KRT35Q92764 455 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 CEMIPQ8WUJ3 1361 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 TPST1O60507 370 aa19.39■□□□□ 0.7
SHANK3-203ENST00000445220 KCNK10P57789 538 aa19.39■□□□□ 0.7
SHANK3-203ENST00000445220 CCDC142Q17RM4 750 aa19.39■□□□□ 0.7
SHANK3-203ENST00000445220 LRRC74BQ6ZQY2 392 aa19.39■□□□□ 0.7
SHANK3-203ENST00000445220 TBC1D16Q8TBP0 767 aa19.39■□□□□ 0.7
SHANK3-203ENST00000445220 GLMNQ92990 594 aa19.39■□□□□ 0.7
SHANK3-203ENST00000445220 FAM118BQ9BPY3 351 aa19.39■□□□□ 0.7
SHANK3-203ENST00000445220 TMEM120AQ9BXJ8 343 aa19.39■□□□□ 0.7
SHANK3-203ENST00000445220 GABBR1Q9UBS5 961 aa19.39■□□□□ 0.7
SHANK3-203ENST00000445220 C2CD2Q9Y426 696 aa19.39■□□□□ 0.7
SHANK3-203ENST00000445220 ZBTB39O15060 712 aa19.39■□□□□ 0.69
SHANK3-203ENST00000445220 NOP9Q86U38 636 aaKnown RBP19.39■□□□□ 0.69
SHANK3-203ENST00000445220 TNIP2Q8NFZ5 429 aa19.39■□□□□ 0.69
SHANK3-203ENST00000445220 FBXO25Q8TCJ0 367 aa19.39■□□□□ 0.69
SHANK3-203ENST00000445220 LACRTQ9GZZ8 138 aa19.39■□□□□ 0.69
SHANK3-203ENST00000445220 ILKAPQ9H0C8 392 aaPredicted RBP19.39■□□□□ 0.69
SHANK3-203ENST00000445220 DDX18Q9NVP1 670 aaKnown RBP19.39■□□□□ 0.69
SHANK3-203ENST00000445220 CNOT7Q9UIV1 285 aaKnown RBP19.39■□□□□ 0.69
SHANK3-203ENST00000445220 DIP2CQ9Y2E4 1556 aa19.39■□□□□ 0.69
SHANK3-203ENST00000445220 DAGLAQ9Y4D2 1042 aa19.39■□□□□ 0.69
SHANK3-203ENST00000445220 TNFAIP8O95379 198 aa19.39■□□□□ 0.69
SHANK3-203ENST00000445220 SPP2Q13103 211 aa19.39■□□□□ 0.69
SHANK3-203ENST00000445220 STRIP1Q5VSL9 837 aa19.39■□□□□ 0.69
SHANK3-203ENST00000445220 CRELD2Q6UXH1 353 aaPredicted RBP19.39■□□□□ 0.69
SHANK3-203ENST00000445220 CDC42EP4Q9H3Q1 356 aaKnown RBP19.39■□□□□ 0.69
SHANK3-203ENST00000445220 NYAP2Q9P242 653 aa19.39■□□□□ 0.69
SHANK3-203ENST00000445220 INO80Q9ULG1 1556 aaPredicted RBP19.39■□□□□ 0.69
SHANK3-203ENST00000445220 NPHP3-ACAD11A0A0J9YXS1 232 aa19.39■□□□□ 0.69
SHANK3-203ENST00000445220 NFKBIAP25963 317 aa19.39■□□□□ 0.69
SHANK3-203ENST00000445220 ROR2Q01974 943 aaKnown RBP19.39■□□□□ 0.69
SHANK3-203ENST00000445220 TTLL4Q14679 1199 aa19.39■□□□□ 0.69
SHANK3-203ENST00000445220 TMPRSS6Q8IU80 811 aa19.39■□□□□ 0.69
SHANK3-203ENST00000445220 WNK4Q96J92 1243 aa19.39■□□□□ 0.69
SHANK3-203ENST00000445220 CTDNEP1O95476 244 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 COBLL1Q53SF7 1204 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 MROH9Q5TGP6 573 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 TRIM54Q9BYV2 358 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 ATAD3AQ9NVI7 634 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 A0A087X0T9 212 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 C3orf70A6NLC5 250 aaPredicted RBP19.38■□□□□ 0.69
SHANK3-203ENST00000445220 PSMD3O43242 534 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 RPS6KA5O75582 802 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 FKBP9O95302 570 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 FAM228BP0C875 321 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 ALDH5A1P51649 535 aaPredicted RBP19.38■□□□□ 0.69
SHANK3-203ENST00000445220 C4orf22Q6V702 233 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 FKBP9P1Q75LS8 142 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 AGBL1Q96MI9 1066 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 MRPL4Q9BYD3 311 aaKnown RBP19.38■□□□□ 0.69
SHANK3-203ENST00000445220 PCDHA10Q9Y5I2 948 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 OCM2P0CE71 109 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 OCMP0CE72 109 aaPredicted RBP19.38■□□□□ 0.69
SHANK3-203ENST00000445220 TBL3Q12788 808 aaKnown RBP19.38■□□□□ 0.69
SHANK3-203ENST00000445220 KCTD17Q8N5Z5 321 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 BTBD10Q9BSF8 475 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 FAM49AQ9H0Q0 323 aaPredicted RBP19.38■□□□□ 0.69
SHANK3-203ENST00000445220 AGO2Q9UKV8 859 aaKnown RBP19.38■□□□□ 0.69
SHANK3-203ENST00000445220 FLT1P17948 1338 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 KIAA1210Q9ULL0 1709 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 POLBP06746 335 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 SOX6P35712 828 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 RFX5P48382 616 aaPredicted RBP19.38■□□□□ 0.69
SHANK3-203ENST00000445220 NPEPPSP55786 919 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 KIAA1841Q6NSI8 718 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 CROCCP3Q8IVE0 287 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 FLCNQ8NFG4 579 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 BEST2Q8NFU1 509 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 AENQ8WTP8 325 aaKnown RBP19.38■□□□□ 0.69
SHANK3-203ENST00000445220 IL1RL2Q9HB29 575 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 APPL1Q9UKG1 709 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 CPS1P31327 1500 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 KANSL1LA0AUZ9 987 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 BCL10O95999 233 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 APOA4P06727 396 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 RALAP11233 206 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 LDHDQ86WU2 507 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 RBBP8Q99708 897 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 TMEM161AQ9NX61 479 aa19.38■□□□□ 0.69
SHANK3-203ENST00000445220 ASNA1O43681 348 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 ENTPD3O75355 529 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 RBP3P10745 1247 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 SSTR3P32745 418 aaPredicted RBP19.37■□□□□ 0.69
SHANK3-203ENST00000445220 KYAT1Q16773 422 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 DUOXA2Q1HG44 320 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 SWSAP1Q6NVH7 229 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 WDR60Q8WVS4 1066 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 PTPRN2Q92932 1015 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 MTERF3Q96E29 417 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 MKNK1Q9BUB5 465 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 MTFR1LQ9H019 292 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 ZNF446Q9NWS9 450 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 GLRA3O75311 464 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 C4BPBP20851 252 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 ZNF513Q8N8E2 541 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms