RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TJP2Q9UDY2 1190 aa16.19■□□□□ 0.18
APP-208ENST00000439274 DRG1Q9Y295 367 aaKnown RBP16.19■□□□□ 0.18
APP-208ENST00000439274 MYH9P35579 1960 aaKnown RBP16.18■□□□□ 0.18
APP-208ENST00000439274 ITGBL1O95965 494 aaPredicted RBP16.18■□□□□ 0.18
APP-208ENST00000439274 CALB1P05937 261 aa16.18■□□□□ 0.18
APP-208ENST00000439274 WEE2P0C1S8 567 aa16.18■□□□□ 0.18
APP-208ENST00000439274 T-ENOLP0DO92 83 aa16.18■□□□□ 0.18
APP-208ENST00000439274 NAMPTP43490 491 aa16.18■□□□□ 0.18
APP-208ENST00000439274 SLFN12LQ6IEE8 588 aa16.18■□□□□ 0.18
APP-208ENST00000439274 OTOAQ7RTW8 1153 aa16.18■□□□□ 0.18
APP-208ENST00000439274 C10orf82Q8WW14 230 aa16.18■□□□□ 0.18
APP-208ENST00000439274 WDR83Q9BRX9 315 aaKnown RBP16.18■□□□□ 0.18
APP-208ENST00000439274 LRMDAQ9H2I8 198 aa16.18■□□□□ 0.18
APP-208ENST00000439274 ZNF302Q9NR11 478 aa16.18■□□□□ 0.18
APP-208ENST00000439274 PSMC3IPQ9P2W1 217 aaPredicted RBP16.18■□□□□ 0.18
APP-208ENST00000439274 COL11A1P12107 1806 aaPredicted RBP16.18■□□□□ 0.18
APP-208ENST00000439274 SPATA31C2B4DYI2 1134 aa16.18■□□□□ 0.18
APP-208ENST00000439274 GOLGA8RI6L899 631 aa16.18■□□□□ 0.18
APP-208ENST00000439274 PIGRP01833 764 aa16.18■□□□□ 0.18
APP-208ENST00000439274 OATP04181 439 aa16.18■□□□□ 0.18
APP-208ENST00000439274 ITGAVP06756 1048 aa16.18■□□□□ 0.18
APP-208ENST00000439274 ARL2P36404 184 aa16.18■□□□□ 0.18
APP-208ENST00000439274 CTCFP49711 727 aaPredicted RBP16.18■□□□□ 0.18
APP-208ENST00000439274 TMEM132BQ14DG7 1078 aa16.18■□□□□ 0.18
APP-208ENST00000439274 MAPK6Q16659 721 aa16.18■□□□□ 0.18
APP-208ENST00000439274 HIF1AQ16665 826 aa16.18■□□□□ 0.18
APP-208ENST00000439274 UPF1Q92900 1129 aaKnown RBP eCLIP16.18■□□□□ 0.18
APP-208ENST00000439274 NKD2Q969F2 451 aaPredicted RBP16.18■□□□□ 0.18
APP-208ENST00000439274 IMPG2Q9BZV3 1241 aa16.18■□□□□ 0.18
APP-208ENST00000439274 DHX33Q9H6R0 707 aaKnown RBP16.18■□□□□ 0.18
APP-208ENST00000439274 PCDH9Q9HC56 1237 aa16.18■□□□□ 0.18
APP-208ENST00000439274 CISHQ9NSE2 258 aa16.18■□□□□ 0.18
APP-208ENST00000439274 CYP39A1Q9NYL5 469 aa16.18■□□□□ 0.18
APP-208ENST00000439274 RABGEF1Q9UJ41 708 aa16.18■□□□□ 0.18
APP-208ENST00000439274 ZNF214Q9UL59 606 aaPredicted RBP16.18■□□□□ 0.18
APP-208ENST00000439274 SHOC2Q9UQ13 582 aa16.18■□□□□ 0.18
APP-208ENST00000439274 NUMBLQ9Y6R0 609 aa16.18■□□□□ 0.18
APP-208ENST00000439274 TCRBV7S3A2A0A539 114 aa16.17■□□□□ 0.18
APP-208ENST00000439274 NFKBIEO00221 500 aa16.17■□□□□ 0.18
APP-208ENST00000439274 LDHAP00338 332 aaKnown RBP16.17■□□□□ 0.18
APP-208ENST00000439274 ASS1P00966 412 aaKnown RBP16.17■□□□□ 0.18
APP-208ENST00000439274 ATP2A2P16615 1042 aaKnown RBP16.17■□□□□ 0.18
APP-208ENST00000439274 ADRA1DP25100 572 aa16.17■□□□□ 0.18
APP-208ENST00000439274 OTUD4Q01804 1114 aaKnown RBP16.17■□□□□ 0.18
APP-208ENST00000439274 DALRD3Q5D0E6 543 aaKnown RBP16.17■□□□□ 0.18
APP-208ENST00000439274 PPP1R15BQ5SWA1 713 aa16.17■□□□□ 0.18
APP-208ENST00000439274 LRRC38Q5VT99 294 aa16.17■□□□□ 0.18
APP-208ENST00000439274 RGS9BPQ6ZS82 235 aa16.17■□□□□ 0.18
APP-208ENST00000439274 SLC35B2Q8TB61 432 aa16.17■□□□□ 0.18
APP-208ENST00000439274 ACTL9Q8TC94 416 aa16.17■□□□□ 0.18
APP-208ENST00000439274 ZNF75CPQ92670 426 aaPredicted RBP16.17■□□□□ 0.18
APP-208ENST00000439274 RAB3IPQ96QF0 476 aaPredicted RBP16.17■□□□□ 0.18
APP-208ENST00000439274 NPHS2Q9NP85 383 aa16.17■□□□□ 0.18
APP-208ENST00000439274 DONSONQ9NYP3 566 aa16.17■□□□□ 0.18
APP-208ENST00000439274 PPP1R1BQ9UD71 204 aaPredicted RBP16.17■□□□□ 0.18
APP-208ENST00000439274 AGTPBP1Q9UPW5 1226 aa16.17■□□□□ 0.18
APP-208ENST00000439274 FARP1Q9Y4F1 1045 aaPredicted RBP16.17■□□□□ 0.18
APP-208ENST00000439274 C3orf70A6NLC5 250 aaPredicted RBP16.17■□□□□ 0.18
APP-208ENST00000439274 IL1R2P27930 398 aa16.17■□□□□ 0.18
APP-208ENST00000439274 NRLP54845 237 aa16.17■□□□□ 0.18
APP-208ENST00000439274 HMGCS2P54868 508 aa16.17■□□□□ 0.18
APP-208ENST00000439274 CAPSQ13938 189 aa16.17■□□□□ 0.18
APP-208ENST00000439274 RHPN2Q8IUC4 686 aa16.17■□□□□ 0.18
APP-208ENST00000439274 CPT1BQ92523 772 aa16.17■□□□□ 0.18
APP-208ENST00000439274 SLC7A6OSQ96CW6 309 aaPredicted RBP16.17■□□□□ 0.18
APP-208ENST00000439274 ALG13Q9NP73 1137 aaKnown RBP16.17■□□□□ 0.18
APP-208ENST00000439274 ATP2A1O14983 1001 aa16.16■□□□□ 0.18
APP-208ENST00000439274 CD48P09326 243 aa16.16■□□□□ 0.18
APP-208ENST00000439274 GM2AP17900 193 aa16.16■□□□□ 0.18
APP-208ENST00000439274 RFC1P35251 1148 aaPredicted RBP16.16■□□□□ 0.18
APP-208ENST00000439274 BACE1P56817 501 aa16.16■□□□□ 0.18
APP-208ENST00000439274 GEMIN4P57678 1058 aaKnown RBP16.16■□□□□ 0.18
APP-208ENST00000439274 OVGP1Q12889 678 aa16.16■□□□□ 0.18
APP-208ENST00000439274 CRYMQ14894 314 aa16.16■□□□□ 0.18
APP-208ENST00000439274 PLEKHG4Q58EX7 1191 aa16.16■□□□□ 0.18
APP-208ENST00000439274 EFHC2Q5JST6 749 aa16.16■□□□□ 0.18
APP-208ENST00000439274 ANKRD20A2Q5SQ80 823 aa16.16■□□□□ 0.18
APP-208ENST00000439274 NBPF12Q5TAG4 269 aaPredicted RBP16.16■□□□□ 0.18
APP-208ENST00000439274 ANKRD20A1Q5TYW2 823 aa16.16■□□□□ 0.18
APP-208ENST00000439274 ANKRD20A3Q5VUR7 823 aa16.16■□□□□ 0.18
APP-208ENST00000439274 ARFGAP1Q8N6T3 406 aa16.16■□□□□ 0.18
APP-208ENST00000439274 TMEM35BQ8NCS4 154 aa16.16■□□□□ 0.18
APP-208ENST00000439274 JOSD2Q8TAC2 188 aa16.16■□□□□ 0.18
APP-208ENST00000439274 PYROXD1Q8WU10 500 aa16.16■□□□□ 0.18
APP-208ENST00000439274 SLC7A3Q8WY07 619 aa16.16■□□□□ 0.18
APP-208ENST00000439274 SLC5A4Q9NY91 659 aa16.16■□□□□ 0.18
APP-208ENST00000439274 SENP1Q9P0U3 644 aa16.16■□□□□ 0.18
APP-208ENST00000439274 SLC24A2Q9UI40 661 aa16.16■□□□□ 0.18
APP-208ENST00000439274 CEP83Q9Y592 693 aa16.16■□□□□ 0.18
APP-208ENST00000439274 CST8O60676 142 aa16.16■□□□□ 0.18
APP-208ENST00000439274 PSMA2P25787 234 aa16.16■□□□□ 0.18
APP-208ENST00000439274 EPHB2P29323 1055 aa16.16■□□□□ 0.18
APP-208ENST00000439274 SLC18A1P54219 525 aa16.16■□□□□ 0.18
APP-208ENST00000439274 PIGHQ14442 188 aaPredicted RBP16.16■□□□□ 0.18
APP-208ENST00000439274 TAF1BQ53T94 588 aaPredicted RBP16.16■□□□□ 0.18
APP-208ENST00000439274 DENND1BQ6P3S1 775 aa16.16■□□□□ 0.18
APP-208ENST00000439274 BZW1Q7L1Q6 419 aaKnown RBP16.16■□□□□ 0.18
APP-208ENST00000439274 LONP2Q86WA8 852 aa16.16■□□□□ 0.18
APP-208ENST00000439274 TMEM130Q8N3G9 435 aa16.16■□□□□ 0.18
APP-208ENST00000439274 TCHPQ9BT92 498 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms