RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 H3BRJ5 948 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 PEX11AO75192 247 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 HAUS5O94927 633 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 FSTL1Q12841 308 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 THOC5Q13769 683 aaKnown RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 ZCCHC9Q8N567 271 aaKnown RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 CEP120Q8N960 986 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 CCDC124Q96CT7 223 aaKnown RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 SLITRK1Q96PX8 696 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 XPNPEP1Q9NQW7 623 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 PARVAQ9NVD7 372 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 COL16A1Q07092 1604 aaPredicted RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 SLC26A4O43511 780 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 KIF1CO43896 1103 aaKnown RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 EDF1O60869 148 aaKnown RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 ENTPD3O75355 529 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 VNN1O95497 513 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 CALB2P22676 271 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 MAN1A1P33908 653 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 ALDH18A1P54886 795 aaKnown RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 FAAP100Q0VG06 881 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 NFIL3Q16649 462 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 SH3PXD2AQ5TCZ1 1133 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 DARS2Q6PI48 645 aaKnown RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 MON1BQ7L1V2 547 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 LMNTD2Q8IXW0 634 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 UBA3Q8TBC4 463 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 ACSS2Q9NR19 701 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 HERC5Q9UII4 1024 aaKnown RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 MEI4A8MW99 385 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 CLGNO14967 610 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 STAM2O75886 525 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 INHBAP08476 426 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 MAPTP10636 758 aaKnown RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 MYL2P10916 166 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 SLC1A1P43005 524 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 GPX6P59796 221 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 TNFAIP8L3Q5GJ75 292 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 ASRGL1Q7L266 308 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 FAM160B2Q86V87 743 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 TTLL6Q8N841 843 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 C12orf50Q8NA57 414 aaPredicted RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 PPP1R14CQ8TAE6 165 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 DNAJC9Q8WXX5 260 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 USP6NLQ92738 828 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 SLC7A6OSQ96CW6 309 aaPredicted RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 PPP1R36Q96LQ0 422 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 TSSK1BQ9BXA7 367 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 MOV10L1Q9BXT6 1211 aaKnown RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 PDGFDQ9GZP0 370 aaPredicted RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 MANSC1Q9H8J5 431 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 PSMC3IPQ9P2W1 217 aaPredicted RBP13.11□□□□□ -0.31
CDH3-202ENST00000429102 POLIQ9UNA4 740 aa13.11□□□□□ -0.31
CDH3-202ENST00000429102 SPATA31A6Q5VVP1 1343 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 DCTN3O75935 186 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 GMPRP36959 345 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 NCKAP1LP55160 1127 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 PSMC1P62191 440 aaKnown RBP13.1□□□□□ -0.31
CDH3-202ENST00000429102 RIPK1Q13546 671 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 CASC4Q6P4E1 433 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 TAS1R3Q7RTX0 852 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 ASAP3Q8TDY4 903 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 STK32AQ8WU08 396 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 HAPLN2Q9GZV7 340 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 SPATS2LQ9NUQ6 558 aaKnown RBP13.1□□□□□ -0.31
CDH3-202ENST00000429102 WASF2Q9Y6W5 498 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 ARHGAP42A6NI28 874 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 AP1G2O75843 785 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 TPBGLP0DKB5 382 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 ELK3P41970 407 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 ATXN3P54252 364 aaPredicted RBP13.1□□□□□ -0.31
CDH3-202ENST00000429102 IGBP1P78318 339 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 CAV1Q03135 178 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 KLF1Q13351 362 aaPredicted RBP13.1□□□□□ -0.31
CDH3-202ENST00000429102 KBTBD12Q3ZCT8 623 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 PPP6R3Q5H9R7 873 aaPredicted RBP13.1□□□□□ -0.31
CDH3-202ENST00000429102 RNF43Q68DV7 783 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 MCF2L2Q86YR7 1114 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 IGDCC3Q8IVU1 814 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 ARID3BQ8IVW6 561 aaPredicted RBP13.1□□□□□ -0.31
CDH3-202ENST00000429102 C4orf19Q8IY42 314 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 BBOF1Q8ND07 529 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 ARMC2Q8NEN0 867 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 MAGEC3Q8TD91 643 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 C7orf43Q8WVR3 580 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 WDR60Q8WVS4 1066 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 CYP4F11Q9HBI6 524 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 GJA3Q9Y6H8 435 aa13.1□□□□□ -0.31
CDH3-202ENST00000429102 ASNSP08243 561 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 RBP3P10745 1247 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 KLRC2P26717 231 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 RGS7P49802 495 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 HMGCS2P54868 508 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 BPIFB4P59827 614 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 TMPRSS15P98073 1019 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 TRIM50Q86XT4 487 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 FBXO27Q8NI29 283 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 TFAP2BQ92481 460 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 RREB1Q92766 1687 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms