RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 INPP5FQ9Y2H2 1132 aa9.38□□□□□ -0.91
HDAC1-202ENST00000428704 IPPQ9Y573 584 aa9.38□□□□□ -0.91
HDAC1-202ENST00000428704 HELZ2Q9BYK8 2649 aaKnown RBP9.38□□□□□ -0.91
HDAC1-202ENST00000428704 ITPR1Q14643 2758 aa9.38□□□□□ -0.91
HDAC1-202ENST00000428704 PDCD11Q14690 1871 aaKnown RBP9.38□□□□□ -0.91
HDAC1-202ENST00000428704 TRIP11Q15643 1979 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 CNTNAP2Q9UHC6 1331 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 MIA3Q5JRA6 1907 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 FRMD3A2A2Y4 597 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 LGALS16A8MUM7 142 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 GIPC1O14908 333 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 TEX28O15482 410 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 MFAP3LO75121 409 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 KIF20AO95235 890 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 TPM1P09493 284 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 ZNF806P0C7X5 589 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 SPATA31D3P0C874 917 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 SKIP12755 728 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 AXLP30530 894 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 NAMPTP43490 491 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 CXCL12P48061 93 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 ETF1P62495 437 aaKnown RBP9.37□□□□□ -0.91
HDAC1-202ENST00000428704 FZD5Q13467 585 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 NOMO2Q5JPE7 1267 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 RNF43Q68DV7 783 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 ANKRD40Q6AI12 368 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 NOTUMQ6P988 496 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 C19orf48Q6RUI8 117 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 GLB1LQ6UWU2 654 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 SPATA31D4Q6ZUB0 917 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 MTERF4Q7Z6M4 381 aaKnown RBP9.37□□□□□ -0.91
HDAC1-202ENST00000428704 TMTC1Q8IUR5 882 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 CSGALNACT2Q8N6G5 542 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 KIAA0895Q8NCT3 520 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 HDAC7Q8WUI4 952 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 RPS6KC1Q96S38 1066 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 KXD1Q9BQD3 176 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 KIFC3Q9BVG8 833 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 NUP58Q9BVL2 599 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 PRKD2Q9BZL6 878 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 FZD8Q9H461 694 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 PLEKHA4Q9H4M7 779 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 RSAD1Q9HA92 442 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 PRDM9Q9NQV7 894 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 HEBP1Q9NRV9 189 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 MAGEC2Q9UBF1 373 aaPredicted RBP9.37□□□□□ -0.91
HDAC1-202ENST00000428704 DNAJB4Q9UDY4 337 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 SSX2IPQ9Y2D8 614 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 USP20Q9Y2K6 914 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 HES2Q9Y543 173 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 UNC79Q9P2D8 2635 aa9.37□□□□□ -0.91
HDAC1-202ENST00000428704 PHLPP2Q6ZVD8 1323 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 C2orf16Q68DN1 1984 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 A0A1B0GUA9 196 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 DDHD2O94830 711 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 GYPCP04921 128 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 MMP16P51512 607 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 ADKP55263 362 aaKnown RBP9.36□□□□□ -0.91
HDAC1-202ENST00000428704 SATB1Q01826 763 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 FAM187BQ17R55 369 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 HSP90AA4PQ58FG1 418 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 HEATR6Q6AI08 1181 aaKnown RBP9.36□□□□□ -0.91
HDAC1-202ENST00000428704 TRIM65Q6PJ69 517 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 C1orf186Q6ZWK4 172 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 GRASPQ7Z6J2 395 aaPredicted RBP9.36□□□□□ -0.91
HDAC1-202ENST00000428704 LONP2Q86WA8 852 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 ZNF280BQ86YH2 543 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 SYT2Q8N9I0 419 aaPredicted RBP9.36□□□□□ -0.91
HDAC1-202ENST00000428704 PRR7Q8TB68 274 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 PGBD4Q96DM1 585 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 ERGIC2Q96RQ1 377 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 PDZD7Q9H5P4 517 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 L2HGDHQ9H9P8 463 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 PRMT7Q9NVM4 692 aaPredicted RBP9.36□□□□□ -0.91
HDAC1-202ENST00000428704 TRMT1Q9NXH9 659 aaKnown RBP9.36□□□□□ -0.91
HDAC1-202ENST00000428704 MAPK8IP1Q9UQF2 711 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 DMXL2Q8TDJ6 3036 aa9.36□□□□□ -0.91
HDAC1-202ENST00000428704 TRIM49BA6NDI0 452 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 CYSRT1A8MQ03 144 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 RNF223E7ERA6 249 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 MAN2B1O00754 1011 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 HIP1RO75146 1068 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 NPTXRO95502 500 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 SOD2P04179 222 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 PRKCBP05771 671 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 PLA2G4BP0C869 781 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 ITGA4P13612 1032 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 CASP14P31944 242 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 MLH1P40692 756 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 SLC12A3P55017 1021 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 MARSP56192 900 aaKnown RBP9.35□□□□□ -0.91
HDAC1-202ENST00000428704 UBXN1Q04323 297 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 DSC1Q08554 894 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 ZCWPW2Q504Y3 356 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 SH3PXD2AQ5TCZ1 1133 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 EEF1DP3Q658K8 133 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 DESI1Q6ICB0 168 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 RINT1Q6NUQ1 792 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 KIAA1211LQ6NV74 962 aa9.35□□□□□ -0.91
HDAC1-202ENST00000428704 SLC27A1Q6PCB7 646 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms