RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 C1QTNF7Q9BXJ2 289 aa10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 ALDH8A1Q9H2A2 487 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 TLR8Q9NR97 1041 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 POLLQ9UGP5 575 aa10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 PDS5AQ29RF7 1337 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 M0QYT0 321 aa10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 APRTP07741 180 aa10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 GARTP22102 1010 aa10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 SLC7A5Q01650 507 aa10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 PTK6Q13882 451 aa10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 NUDCD3Q8IVD9 361 aa10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 SNF8Q96H20 258 aa10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 SPACA7Q96KW9 195 aa10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 HPS4Q9NQG7 708 aa10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 NMRK1Q9NWW6 199 aa10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 LIMA1Q9UHB6 759 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 PCDHB5Q9Y5E4 795 aa10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 MYO3AQ8NEV4 1616 aa10.38□□□□□ -0.75
CLTCL1-202ENST00000427926 LRRIQ1Q96JM4 1722 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 DIP2AQ14689 1571 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 TMEM88BA6NKF7 163 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 CTSEP14091 401 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 SNRPFP62306 86 aaKnown RBP10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 GRIN1Q05586 938 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 NECAB2Q7Z6G3 386 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 SGMS1Q86VZ5 419 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 CACUL1Q86Y37 369 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 FIBCD1Q8N539 461 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 AKT1S1Q96B36 256 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 MIR1-1HGQ9H1L0 117 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.37□□□□□ -0.757e-7■■■■■ 41.8
CLTCL1-202ENST00000427926 REREQ9P2R6 1566 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 ATP8B1O43520 1251 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 CLASP2O75122 1294 aaKnown RBP10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 EPM2AIP1Q7L775 607 aaPredicted RBP10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 ZNF614Q8N883 585 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 AGR3Q8TD06 166 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 KLHL29Q96CT2 875 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 MRPL17Q9NRX2 175 aaKnown RBP10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 WWOXQ9NZC7 414 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 H2AFY2Q9P0M6 372 aaPredicted RBP10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 APEX2Q9UBZ4 518 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 PCDHB9Q9Y5E1 797 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 NEXMIFQ5QGS0 1516 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 FER1L4A9Z1Z3 1794 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 ANGPT2O15123 496 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 SP100P23497 879 aaPredicted RBP10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 ATP2C1P98194 919 aaPredicted RBP10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 PPATQ06203 517 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 GRIK4Q16099 956 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 GRAMD1BQ3KR37 738 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 SGO1Q5FBB7 561 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 SYCP2LQ5T4T6 812 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 IZUMO3Q5VZ72 239 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 GPAT2Q6NUI2 795 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 BLOC1S5Q8TDH9 187 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 DNAJB3Q8WWF6 145 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 RFFLQ8WZ73 363 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 CPB2Q96IY4 423 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 PITPNM3Q9BZ71 974 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 NSMCE4AQ9NXX6 385 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 ANGPTL2Q9UKU9 493 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 INTUQ9ULD6 942 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 SNX5Q9Y5X3 404 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 MLNP12872 115 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 TCF3P15923 654 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 FGFR2P21802 821 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 THOP1P52888 689 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 GEMIN4P57678 1058 aaKnown RBP10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 LRRC23Q53EV4 343 aaPredicted RBP10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 FOXR1Q6PIV2 292 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 TRIM65Q6PJ69 517 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 CAMKK1Q8N5S9 505 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 SLC30A5Q8TAD4 765 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 SH3GL3Q99963 347 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 VTA1Q9NP79 307 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 C20orf96Q9NUD7 363 aaPredicted RBP10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 PITPNM2Q9BZ72 1349 aa10.37□□□□□ -0.75
CLTCL1-202ENST00000427926 MUTP22033 750 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 NAPEPLDQ6IQ20 393 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 MPZL3Q6UWV2 235 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 OSCP1Q8WVF1 389 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 C1orf54Q8WWF1 131 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 VPS33BQ9H267 617 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 C17orf75Q9HAS0 396 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 DCCP43146 1447 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 RNF103-CHMP3A0A140T963 221 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 TLL1O43897 1013 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 ANXA9O76027 345 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 HIF1AQ16665 826 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 RASIP1Q5U651 963 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 ICE2Q659A1 982 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 NUGGCQ68CJ6 796 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 CCDC149Q6ZUS6 474 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 SYTL1Q8IYJ3 562 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 SUSD6Q92537 303 aa10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 OXCT2Q9BYC2 517 aaPredicted RBP10.36□□□□□ -0.75
CLTCL1-202ENST00000427926 TMEM8AQ9HCN3 771 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms