RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 IL16Q14005 1332 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 ALKQ9UM73 1620 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 CCDC194A0A1B0GVG4 234 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 WIPF3A6NGB9 483 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 PCDHGA12O60330 932 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 ERN1O75460 977 aaKnown RBP6.04□□□□□ -1.44
LINC00458-202ENST00000427299 MAP4K4O95819 1239 aaPredicted RBP6.04□□□□□ -1.44
LINC00458-202ENST00000427299 CKBP12277 381 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 PTMSP20962 102 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 PER3P56645 1201 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 SCAND1P57086 179 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 GEN1Q17RS7 908 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 FAM180AQ6UWF9 173 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 ZNF788Q6ZQV5 615 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 SEM1Q6ZVN7 128 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 KCNK18Q7Z418 384 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 FMNL3Q8IVF7 1028 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 COLGALT2Q8IYK4 626 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 SSH3Q8TE77 659 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 FATE1Q969F0 183 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 HOOK2Q96ED9 719 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 UROC1Q96N76 676 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 MYOCQ99972 504 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 HEPHQ9BQS7 1158 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 RTFDC1Q9BY42 306 aaPredicted RBP6.04□□□□□ -1.44
LINC00458-202ENST00000427299 SENP6Q9GZR1 1112 aaPredicted RBP6.04□□□□□ -1.44
LINC00458-202ENST00000427299 CDH19Q9H159 772 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 RWDD1Q9H446 243 aaPredicted RBP6.04□□□□□ -1.44
LINC00458-202ENST00000427299 LDAHQ9H6V9 325 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 IFT122Q9HBG6 1241 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 DMRT3Q9NQL9 472 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 IL17RBQ9NRM6 502 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 HSFX1Q9UBD0 423 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 AJAP1Q9UKB5 411 aaPredicted RBP6.04□□□□□ -1.44
LINC00458-202ENST00000427299 MTO1Q9Y2Z2 717 aaKnown RBP6.04□□□□□ -1.44
LINC00458-202ENST00000427299 PCDHGA9Q9Y5G4 932 aaKnown RBP6.04□□□□□ -1.44
LINC00458-202ENST00000427299 PCDHGA8Q9Y5G5 932 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 PCDHGA7Q9Y5G6 932 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 PCDHGA6Q9Y5G7 932 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 PCDHGA3Q9Y5H0 932 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 PCDHGA2Q9Y5H1 932 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 AK9Q5TCS8 1911 aa6.03□□□□□ -1.44
LINC00458-202ENST00000427299 E2F8A0AVK6 867 aa6.03□□□□□ -1.44
LINC00458-202ENST00000427299 GOLGA8AA7E2F4 631 aa6.03□□□□□ -1.44
LINC00458-202ENST00000427299 TSPAN6O43657 245 aa6.03□□□□□ -1.44
LINC00458-202ENST00000427299 PCSK1P29120 753 aa6.03□□□□□ -1.44
LINC00458-202ENST00000427299 PIN1Q13526 163 aaPredicted RBP6.03□□□□□ -1.44
LINC00458-202ENST00000427299 PCBP2Q15366 365 aaKnown RBP eCLIP6.03□□□□□ -1.44
LINC00458-202ENST00000427299 PTPN21Q16825 1174 aa6.03□□□□□ -1.44
LINC00458-202ENST00000427299 MUM1L1Q5H9M0 696 aa6.03□□□□□ -1.44
LINC00458-202ENST00000427299 KIAA0895LQ68EN5 471 aa6.03□□□□□ -1.44
LINC00458-202ENST00000427299 ZBTB46Q86UZ6 589 aa6.03□□□□□ -1.44
LINC00458-202ENST00000427299 MARS2Q96GW9 593 aaKnown RBP6.03□□□□□ -1.44
LINC00458-202ENST00000427299 TIMP4Q99727 224 aa6.03□□□□□ -1.44
LINC00458-202ENST00000427299 QRSL1Q9H0R6 528 aaKnown RBP6.03□□□□□ -1.44
LINC00458-202ENST00000427299 DDX19BQ9UMR2 479 aa6.03□□□□□ -1.44
LINC00458-202ENST00000427299 A0A1W2PP64 1363 aa6.03□□□□□ -1.44
LINC00458-202ENST00000427299 PTCH1Q13635 1447 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 FAM135BQ49AJ0 1406 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 YEATS2Q9ULM3 1422 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 FAM208AQ9UK61 1670 aaKnown RBP6.02□□□□□ -1.45
LINC00458-202ENST00000427299 LOC102724159A0A0B4J2E5 919 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 TPD52L2O43399 206 aaKnown RBP6.02□□□□□ -1.45
LINC00458-202ENST00000427299 RFPL1O75677 317 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 MT-CO1P00395 513 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 MYBL2P10244 700 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 MTNR1BP49286 362 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 RARSP54136 660 aaKnown RBP6.02□□□□□ -1.45
LINC00458-202ENST00000427299 CALD1Q05682 793 aaKnown RBP6.02□□□□□ -1.45
LINC00458-202ENST00000427299 MVPQ14764 893 aaKnown RBP6.02□□□□□ -1.45
LINC00458-202ENST00000427299 PWP2Q15269 919 aaKnown RBP6.02□□□□□ -1.45
LINC00458-202ENST00000427299 LRRC41Q15345 812 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 ANO4Q32M45 955 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 TMEM240Q5SV17 173 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 UBE3BQ7Z3V4 1068 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 Q8NA96 180 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 ACE2Q9BYF1 805 aaPredicted RBP6.02□□□□□ -1.45
LINC00458-202ENST00000427299 RHOBTB2Q9BYZ6 727 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 SLC29A3Q9BZD2 475 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 ZNF277Q9NRM2 450 aaPredicted RBP6.02□□□□□ -1.45
LINC00458-202ENST00000427299 CCM2LQ9NUG4 571 aaPredicted RBP6.02□□□□□ -1.45
LINC00458-202ENST00000427299 ISY1Q9ULR0 285 aaKnown RBP6.02□□□□□ -1.45
LINC00458-202ENST00000427299 ENTPD2Q9Y5L3 495 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 ACTL7AQ9Y615 435 aa6.02□□□□□ -1.45
LINC00458-202ENST00000427299 DIP2BQ9P265 1576 aa6.01□□□□□ -1.45
LINC00458-202ENST00000427299 YTHDC2Q9H6S0 1430 aaKnown RBP6.01□□□□□ -1.45
LINC00458-202ENST00000427299 NRXN3Q9Y4C0 1643 aa6.01□□□□□ -1.45
LINC00458-202ENST00000427299 PROB1E7EW31 1015 aa6.01□□□□□ -1.45
LINC00458-202ENST00000427299 TEX33O43247 280 aa6.01□□□□□ -1.45
LINC00458-202ENST00000427299 PEX1O43933 1283 aa6.01□□□□□ -1.45
LINC00458-202ENST00000427299 BCAR3O75815 825 aa6.01□□□□□ -1.45
LINC00458-202ENST00000427299 MTHFD2P13995 350 aa6.01□□□□□ -1.45
LINC00458-202ENST00000427299 FOLR3P41439 243 aa6.01□□□□□ -1.45
LINC00458-202ENST00000427299 MCAMP43121 646 aa6.01□□□□□ -1.45
LINC00458-202ENST00000427299 SLC6A9P48067 706 aa6.01□□□□□ -1.45
LINC00458-202ENST00000427299 NOMO3P69849 1222 aa6.01□□□□□ -1.45
LINC00458-202ENST00000427299 SRSF4Q08170 494 aaKnown RBP6.01□□□□□ -1.45
LINC00458-202ENST00000427299 ODF1Q14990 250 aa6.01□□□□□ -1.45
LINC00458-202ENST00000427299 NOMO1Q15155 1222 aa6.01□□□□□ -1.45
LINC00458-202ENST00000427299 NOMO2Q5JPE7 1267 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms