RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 MRPS31Q92665 395 aaKnown RBP13.87□□□□□ -0.19
NELFE-203ENST00000426722 DNAJC19Q96DA6 116 aa13.87□□□□□ -0.19
NELFE-203ENST00000426722 TMEM206Q9H813 350 aa13.87□□□□□ -0.19
NELFE-203ENST00000426722 SEMA4GQ9NTN9 838 aa13.87□□□□□ -0.19
NELFE-203ENST00000426722 TDP1Q9NUW8 608 aa13.87□□□□□ -0.19
NELFE-203ENST00000426722 GREB1Q4ZG55 1949 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 TRDMT1O14717 391 aaKnown RBP13.86□□□□□ -0.19
NELFE-203ENST00000426722 SLC30A4O14863 429 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 PRPF40AO75400 957 aaKnown RBP13.86□□□□□ -0.19
NELFE-203ENST00000426722 LHX1P48742 406 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 TFAMQ00059 246 aaKnown RBP13.86□□□□□ -0.19
NELFE-203ENST00000426722 TNK2Q07912 1038 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 CUL4AQ13619 759 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 LPAL2Q16609 132 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 TMEM196Q5HYL7 178 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 INTS6LQ5JSJ4 861 aaKnown RBP13.86□□□□□ -0.19
NELFE-203ENST00000426722 CC2D1AQ6P1N0 951 aaPredicted RBP13.86□□□□□ -0.19
NELFE-203ENST00000426722 CCDC73Q6ZRK6 1079 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 PRR23CQ6ZRP0 262 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 Q6ZS52 159 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 CEP68Q76N32 757 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 DPH6Q7L8W6 267 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 TMEM150AQ86TG1 271 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 MAB21L3Q8N8X9 362 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 TTC8Q8TAM2 541 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 TRMT2BQ96GJ1 504 aaKnown RBP13.86□□□□□ -0.19
NELFE-203ENST00000426722 LOXL4Q96JB6 756 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 FAM213AQ9BRX8 229 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 GDAP2Q9NXN4 497 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 DDX43Q9NXZ2 648 aaKnown RBP13.86□□□□□ -0.19
NELFE-203ENST00000426722 FBXO2Q9UK22 296 aaPredicted RBP13.86□□□□□ -0.19
NELFE-203ENST00000426722 ITGA11Q9UKX5 1188 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 AGAP1Q9UPQ3 857 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 CLIC4Q9Y696 253 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 CACNA1AO00555 2505 aa13.86□□□□□ -0.19
NELFE-203ENST00000426722 FRMD3A2A2Y4 597 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 VPS37CA5D8V6 355 aaPredicted RBP13.85□□□□□ -0.19
NELFE-203ENST00000426722 MYMKA6NI61 221 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 EXTL3O43909 919 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 AKAP3O75969 853 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 NOL4O94818 638 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 GCNT3O95395 438 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 ITGB3P05106 788 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 DRD1P21728 446 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 POLR2BP30876 1174 aaKnown RBP13.85□□□□□ -0.19
NELFE-203ENST00000426722 RBP5P82980 135 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 DMWDQ09019 674 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 PDGFRLQ15198 375 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 SURF1Q15526 300 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 FBXO43Q4G163 708 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 USP49Q70CQ1 688 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 SYCP3Q8IZU3 236 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 PDCL2Q8N4E4 241 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 CAMKK1Q8N5S9 505 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 TOP6BLQ8N6T0 577 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 C1orf127Q8N9H9 656 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 DDX1Q92499 740 aaKnown RBP13.85□□□□□ -0.19
NELFE-203ENST00000426722 USP13Q92995 863 aaPredicted RBP13.85□□□□□ -0.19
NELFE-203ENST00000426722 FUBP3Q96I24 572 aaKnown RBP eCLIP13.85□□□□□ -0.19
NELFE-203ENST00000426722 MYRFLQ96LU7 910 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 PI4K2AQ9BTU6 479 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 HPS4Q9NQG7 708 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 TMLHEQ9NVH6 421 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 RBAKQ9NYW8 714 aaPredicted RBP13.85□□□□□ -0.19
NELFE-203ENST00000426722 L1RE1Q9UN81 338 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 R3HCC1Q9Y3T6 440 aaKnown RBP13.85□□□□□ -0.19
NELFE-203ENST00000426722 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.85□□□□□ -0.19
NELFE-203ENST00000426722 GPR179Q6PRD1 2367 aa13.85□□□□□ -0.19
NELFE-203ENST00000426722 ANAPC1Q9H1A4 1944 aa13.84□□□□□ -0.19
NELFE-203ENST00000426722 DCDC2BA2VCK2 349 aa13.84□□□□□ -0.19
NELFE-203ENST00000426722 PCSK1P29120 753 aa13.84□□□□□ -0.19
NELFE-203ENST00000426722 FAM160A1Q05DH4 1040 aa13.84□□□□□ -0.19
NELFE-203ENST00000426722 KCNA1Q09470 495 aa13.84□□□□□ -0.19
NELFE-203ENST00000426722 CFAP221Q4G0U5 840 aa13.84□□□□□ -0.19
NELFE-203ENST00000426722 TXNDC8Q6A555 127 aa13.84□□□□□ -0.19
NELFE-203ENST00000426722 HEATR6Q6AI08 1181 aaKnown RBP13.84□□□□□ -0.19
NELFE-203ENST00000426722 STXBP4Q6ZWJ1 553 aa13.84□□□□□ -0.19
NELFE-203ENST00000426722 FAM160A2Q8N612 972 aaPredicted RBP13.84□□□□□ -0.19
NELFE-203ENST00000426722 CSGALNACT2Q8N6G5 542 aa13.84□□□□□ -0.19
NELFE-203ENST00000426722 FSIP1Q8NA03 581 aa13.84□□□□□ -0.19
NELFE-203ENST00000426722 GAB3Q8WWW8 586 aa13.84□□□□□ -0.19
NELFE-203ENST00000426722 CEP295NLQ96MC4 621 aa13.84□□□□□ -0.19
NELFE-203ENST00000426722 LRRC27Q9C0I9 530 aa13.84□□□□□ -0.19
NELFE-203ENST00000426722 SMG9Q9H0W8 520 aaKnown RBP13.84□□□□□ -0.19
NELFE-203ENST00000426722 MAGED2Q9UNF1 606 aaPredicted RBP13.84□□□□□ -0.19
NELFE-203ENST00000426722 SLC8A2Q9UPR5 921 aa13.84□□□□□ -0.19
NELFE-203ENST00000426722 SPAG17Q6Q759 2223 aa13.83□□□□□ -0.2
NELFE-203ENST00000426722 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.83□□□□□ -0.2
NELFE-203ENST00000426722 GABRDO14764 452 aa13.83□□□□□ -0.2
NELFE-203ENST00000426722 CENPBP07199 599 aaPredicted RBP13.83□□□□□ -0.2
NELFE-203ENST00000426722 ADRB1P08588 477 aa13.83□□□□□ -0.2
NELFE-203ENST00000426722 USP17L7P0C7H9 530 aa13.83□□□□□ -0.2
NELFE-203ENST00000426722 TMEM191BP0C7N4 346 aa13.83□□□□□ -0.2
NELFE-203ENST00000426722 IDEP14735 1019 aa13.83□□□□□ -0.2
NELFE-203ENST00000426722 TCF3P15923 654 aa13.83□□□□□ -0.2
NELFE-203ENST00000426722 PFKLP17858 780 aa13.83□□□□□ -0.2
NELFE-203ENST00000426722 LIMK1P53667 647 aa13.83□□□□□ -0.2
NELFE-203ENST00000426722 MYO1EQ12965 1108 aa13.83□□□□□ -0.2
NELFE-203ENST00000426722 SRSF5Q13243 272 aaKnown RBP13.83□□□□□ -0.2
NELFE-203ENST00000426722 FSTL4Q6MZW2 842 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms