RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 AP5Z1O43299 807 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 STX10O60499 249 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 ASS1P00966 412 aaKnown RBP6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 SOD2P04179 222 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 PRKCSHP14314 528 aaPredicted RBP6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 SLC9A1P19634 815 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 CDK11BP21127 795 aaKnown RBP6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 EEF1GP26641 437 aaKnown RBP6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 GTF2F1P35269 517 aaKnown RBP eCLIP6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 PPM1AP35813 382 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 KLK7P49862 253 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 COPB1P53618 953 aaKnown RBP6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 CDH8P55286 799 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 DSG1Q02413 1049 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 KRT17Q04695 432 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 PTPN14Q15678 1187 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 MAN2A1Q16706 1144 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 CCDC142Q17RM4 750 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 SOWAHAQ2M3V2 549 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 ZNF699Q32M78 642 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 WDR72Q3MJ13 1102 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 WSCD1Q658N2 575 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 GJB7Q6PEY0 223 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 DSTYKQ6XUX3 929 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 SCARA5Q6ZMJ2 495 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 ADGRD2Q7Z7M1 963 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 CEP57Q86XR8 500 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 ARHGEF19Q8IW93 802 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 PDCL2Q8N4E4 241 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 DEFB123Q8N688 67 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 FBXL13Q8NEE6 735 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 LNX1Q8TBB1 728 aaPredicted RBP6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 KBTBD7Q8WVZ9 684 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 MYLIPQ8WY64 445 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 RIN2Q8WYP3 895 aaPredicted RBP6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 KAT5Q92993 513 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 ZNF560Q96MR9 790 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 GUCD1Q96NT3 240 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 TMEM209Q96SK2 561 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 ARID3AQ99856 593 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 LPIN3Q9BQK8 851 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 RTP3Q9BQQ7 232 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 MRPL45Q9BRJ2 306 aaKnown RBP6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 TTPALQ9BTX7 342 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 NDST4Q9H3R1 872 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 SMYD3Q9H7B4 428 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 SIX2Q9NPC8 291 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 CHST7Q9NS84 486 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 RAB20Q9NX57 234 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 GDAP2Q9NXN4 497 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 AJAP1Q9UKB5 411 aaPredicted RBP6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 LZTS1Q9Y250 596 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 COQ4Q9Y3A0 265 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 SNX9Q9Y5X1 595 aa6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 SF3B1O75533 1304 aaKnown RBP eCLIP6.13□□□□□ -1.438e-6■■■■■ 107
HERPUD2-204ENST00000426180 COL4A4P53420 1690 aaPredicted RBP6.13□□□□□ -1.43
HERPUD2-204ENST00000426180 TRANK1O15050 2925 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 LAMA3Q16787 3333 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 C2orf71A6NGG8 1288 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 LRRC10BA6NIK2 292 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 LGALS16A8MUM7 142 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 PES1O00541 588 aaKnown RBP6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 PER2O15055 1255 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 EPHB6O15197 1021 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 PMM2O15305 246 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 TBC1D4O60343 1298 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 LILRA1O75019 489 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 CLSTN1O94985 981 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 CXCL14O95715 111 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 STAU1O95793 577 aaKnown RBP6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 CAVIN2O95810 425 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 CALCAP01258 141 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 CYP11A1P05108 521 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 CELA2BP08218 269 aaPredicted RBP6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 WEE2P0C1S8 567 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 OR4Q2P0C623 313 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 CTSAP10619 480 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 IGFBP4P22692 258 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 ACAT1P24752 427 aaKnown RBP6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 LMO2P25791 158 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 PON1P27169 355 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 ATICP31939 592 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 CA8P35219 290 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 PNPLA4P41247 253 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 ASPAP45381 313 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 GLUD2P49448 558 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 NOP14P78316 857 aaKnown RBP6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 RBM10P98175 930 aaKnown RBP6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 FANCCQ00597 558 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 UBE3AQ05086 875 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 MYO1EQ12965 1108 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 ORC1Q13415 861 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 MRPL58Q14197 206 aaKnown RBP6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 PDCD11Q14690 1871 aaKnown RBP6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 PSMD5Q16401 504 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 SGSM1Q2NKQ1 1148 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 USP41Q3LFD5 358 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 SV2CQ496J9 727 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 PHLDB3Q6NSJ2 640 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms