RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 CREBRFQ8IUR6 639 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TOP6BLQ8N6T0 577 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 MRPL43Q8N983 215 aaKnown RBP7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 KBTBD7Q8WVZ9 684 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 AUTS2Q8WXX7 1259 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PIK3R5Q8WYR1 880 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 MRPL38Q96DV4 380 aaKnown RBP7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 NAP1L5Q96NT1 182 aaPredicted RBP7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 RTP3Q9BQQ7 232 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 ANP32EQ9BTT0 268 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TTPALQ9BTX7 342 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 BCO2Q9BYV7 579 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 SDCBP2Q9H190 292 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 RXFP1Q9HBX9 757 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 SIX2Q9NPC8 291 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 NGRNQ9NPE2 291 aaKnown RBP7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TLR9Q9NR96 1032 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 MTMR10Q9NXD2 777 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 FNIP2Q9P278 1114 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 POLIQ9UNA4 740 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 GPSM3Q9Y4H4 160 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 NME7Q9Y5B8 376 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PCDHGC5Q9Y5F6 944 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TIMM13Q9Y5L4 95 aaPredicted RBP7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 SNX9Q9Y5X1 595 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 MTCH2Q9Y6C9 303 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 REV3LO60673 3130 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 CDH23Q9H251 3354 aa7.57□□□□□ -1.2
CHCHD3P1-201ENST00000425516 VWA8A3KMH1 1905 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 C2orf71A6NGG8 1288 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 LGALS16A8MUM7 142 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 HIDE1A8MVS5 230 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 ADAM12O43184 909 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 AP5Z1O43299 807 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 CXCL14O95715 111 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 ODC1P11926 461 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 CDK11BP21127 795 aaKnown RBP7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 WARSP23381 471 aaKnown RBP7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 LMO2P25791 158 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PON1P27169 355 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 ASPAP45381 313 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 GLUD2P49448 558 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 CDH8P55286 799 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 FANCCQ00597 558 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 APBA1Q02410 837 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 KCNC3Q14003 757 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 EXOC3L4Q17RC7 722 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 ZNF667Q5HYK9 610 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 WSCD1Q658N2 575 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PHLDB3Q6NSJ2 640 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 LILRA6Q6PI73 481 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PRSS55Q6UWB4 352 aaPredicted RBP7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TREML4Q6UXN2 200 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 GBP6Q6ZN66 633 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TMC7Q7Z402 723 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 OSTM1Q86WC4 334 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 ARHGEF19Q8IW93 802 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 LINC00528Q8N1L1 170 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TMEM86AQ8N2M4 240 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PDCL2Q8N4E4 241 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 UBR7Q8N806 425 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 RNF214Q8ND24 703 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 APPL2Q8NEU8 664 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 SPATA18Q8TC71 538 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 KREMEN1Q96MU8 473 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 FAM161BQ96MY7 647 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 GUCD1Q96NT3 240 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 ERGIC2Q96RQ1 377 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PKMYT1Q99640 499 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TCF25Q9BQ70 676 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 CLSTN3Q9BQT9 956 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 CRACR2AQ9BSW2 395 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 NIF3L1Q9GZT8 377 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 INTS2Q9H0H0 1204 aaKnown RBP7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 GCNT4Q9P109 453 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 MTRRQ9UBK8 725 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 NXF1Q9UBU9 619 aaKnown RBP7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 DSEQ9UL01 958 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 SIK3Q9Y2K2 1263 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 BACE2Q9Y5Z0 518 aa7.56□□□□□ -1.2
CHCHD3P1-201ENST00000425516 COL4A4P53420 1690 aaPredicted RBP7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 ARHGEF37A1IGU5 675 aa7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 GOLGA6L19H0YKK7 550 aa7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TEX28O15482 410 aa7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 HCRTO43612 131 aa7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 HUS1O60921 280 aa7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 NOL4O94818 638 aa7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 VNN2O95498 520 aa7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 C1RP00736 705 aa7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 URODP06132 367 aa7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 CNPP09543 421 aaKnown RBP7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 RPL17P18621 184 aaKnown RBP7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 ACO1P21399 889 aaKnown RBP7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 PBX1P40424 430 aa7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 TNNC1P63316 161 aa7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 GCNT1Q02742 428 aa7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 YWHAHQ04917 246 aaPredicted RBP7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 INCA1Q0VD86 236 aa7.55□□□□□ -1.2
CHCHD3P1-201ENST00000425516 CETN1Q12798 172 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms