RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 SDK1Q7Z5N4 2213 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 OTOL1A6NHN0 477 aaPredicted RBP13.97□□□□□ -0.17
VRK3-203ENST00000424804 KPNA7A9QM74 516 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 SPECC1L-ADORA2AF8WAN1 911 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 PRPF6O94906 941 aaKnown RBP13.97□□□□□ -0.17
VRK3-203ENST00000424804 PFKFB1P16118 471 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 CTHP32929 405 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 TUFMP49411 452 aaKnown RBP13.97□□□□□ -0.17
VRK3-203ENST00000424804 GPR15P49685 360 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 CCINQ13939 588 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 CCDC142Q17RM4 750 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 L1TD1Q5T7N2 865 aaKnown RBP13.97□□□□□ -0.17
VRK3-203ENST00000424804 LIMS2Q7Z4I7 341 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 OSTM1Q86WC4 334 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 SPEM1Q8N4L4 309 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 STKLD1Q8NE28 680 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 TTC8Q8TAM2 541 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 POMGNT1Q8WZA1 660 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 ACCSQ96QU6 501 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 SEPT5Q99719 369 aaPredicted RBP13.97□□□□□ -0.17
VRK3-203ENST00000424804 TRIM9Q9C026 710 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 SCAND2PQ9GZW5 306 aaPredicted RBP13.97□□□□□ -0.17
VRK3-203ENST00000424804 KBTBD4Q9NVX7 518 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 SIX4Q9UIU6 781 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 DSEQ9UL01 958 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 L1RE1Q9UN81 338 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 EXOC7Q9UPT5 735 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 PCDHB13Q9Y5F0 798 aa13.97□□□□□ -0.17
VRK3-203ENST00000424804 TADA3O75528 432 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 HOXD13P35453 343 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 CXCL12P48061 93 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 CCR3P51677 355 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 POSTNQ15063 836 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 MGAT5BQ3V5L5 792 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 ARHGAP29Q52LW3 1261 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 DGLUCYQ7Z3D6 616 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 ITIH5Q86UX2 942 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 RALGPS2Q86X27 583 aaPredicted RBP13.96□□□□□ -0.17
VRK3-203ENST00000424804 NT5DC4Q86YG4 428 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 BRSK2Q8IWQ3 736 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 PDCL2Q8N4E4 241 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 FSIP1Q8NA03 581 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 GLIS3Q8NEA6 775 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 SPPL2BQ8TCT7 592 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 BPIFB1Q8TDL5 484 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 C2orf15Q8WU43 125 aaKnown RBP13.96□□□□□ -0.17
VRK3-203ENST00000424804 SAAL1Q96ER3 474 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 MSANTD3Q96H12 275 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 HINFPQ9BQA5 517 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 FAM83CQ9BQN1 747 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 FAM213AQ9BRX8 229 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 MAGEF1Q9HAY2 307 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 HPS4Q9NQG7 708 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 OLFML3Q9NRN5 406 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 CCL26Q9Y258 94 aa13.96□□□□□ -0.17
VRK3-203ENST00000424804 EML5Q05BV3 1969 aa13.96□□□□□ -0.18
VRK3-203ENST00000424804 RALGAPA1Q6GYQ0 2036 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 GOLGA6L4A6NEF3 574 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 CHURC1-FNTBB4DL54 471 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 HCRTO43612 131 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 IL18RAPO95256 599 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 FGF19O95750 216 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 GARTP22102 1010 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 POLR2BP30876 1174 aaKnown RBP13.95□□□□□ -0.18
VRK3-203ENST00000424804 FNTBP49356 437 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 ATXN1P54253 815 aaKnown RBP13.95□□□□□ -0.18
VRK3-203ENST00000424804 NLRP12P59046 1061 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 SMARCB1Q12824 385 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 SRSF5Q13243 272 aaKnown RBP13.95□□□□□ -0.18
VRK3-203ENST00000424804 CUL4BQ13620 913 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 PON2Q15165 354 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 SDHAF4Q5VUM1 108 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 PKN3Q6P5Z2 889 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 STXBP4Q6ZWJ1 553 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 YAF2Q8IY57 180 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 CMTM8Q8IZV2 173 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 THEM5Q8N1Q8 247 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 CELF5Q8N6W0 485 aaKnown RBP13.95□□□□□ -0.18
VRK3-203ENST00000424804 CSGALNACT1Q8TDX6 532 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 USP13Q92995 863 aaPredicted RBP13.95□□□□□ -0.18
VRK3-203ENST00000424804 CBWD1Q9BRT8 395 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 GKN1Q9NS71 199 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 NCDNQ9UBB6 729 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 AGAP1Q9UPQ3 857 aa13.95□□□□□ -0.18
VRK3-203ENST00000424804 PTPRJQ12913 1337 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 TPRP12270 2363 aaKnown RBP13.94□□□□□ -0.18
VRK3-203ENST00000424804 GOLGA8IPA6NC78 632 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 GOLGA8JA6NMD2 632 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 GABRDO14764 452 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 ITGB3P05106 788 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 CMA1P23946 247 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 CDC25CP30307 473 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 HOXA6P31267 233 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 ANP32AP39687 249 aaKnown RBP13.94□□□□□ -0.18
VRK3-203ENST00000424804 SYKP43405 635 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 NDUFA8P51970 172 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 KPNA1P52294 538 aaPredicted RBP13.94□□□□□ -0.18
VRK3-203ENST00000424804 NRLP54845 237 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 ALCAMQ13740 583 aa13.94□□□□□ -0.18
VRK3-203ENST00000424804 LPAL2Q16609 132 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms