RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 PHLDB2Q86SQ0 1253 aa24.4■■□□□ 1.5
LSM8-203ENST00000422760 TRPV1Q8NER1 839 aa24.4■■□□□ 1.5
LSM8-203ENST00000422760 TRIM7Q9C029 511 aa24.4■■□□□ 1.5
LSM8-203ENST00000422760 ARHGAP39Q9C0H5 1083 aa24.4■■□□□ 1.5
LSM8-203ENST00000422760 RGS16O15492 202 aaPredicted RBP24.39■■□□□ 1.5
LSM8-203ENST00000422760 ITIH2P19823 946 aa24.39■■□□□ 1.5
LSM8-203ENST00000422760 MMP13P45452 471 aa24.39■■□□□ 1.5
LSM8-203ENST00000422760 ZNF200P98182 395 aaPredicted RBP24.39■■□□□ 1.5
LSM8-203ENST00000422760 PURAQ00577 322 aaKnown RBP24.39■■□□□ 1.5
LSM8-203ENST00000422760 ERMARDQ5T6L9 678 aa24.39■■□□□ 1.5
LSM8-203ENST00000422760 LIN9Q5TKA1 542 aa24.39■■□□□ 1.5
LSM8-203ENST00000422760 TTC27Q6P3X3 843 aa24.39■■□□□ 1.5
LSM8-203ENST00000422760 SLC27A1Q6PCB7 646 aa24.39■■□□□ 1.5
LSM8-203ENST00000422760 TAOK1Q7L7X3 1001 aa24.39■■□□□ 1.5
LSM8-203ENST00000422760 DCAF8L1A6NGE4 600 aa24.39■■□□□ 1.49
LSM8-203ENST00000422760 RARAP10276 462 aa24.39■■□□□ 1.49
LSM8-203ENST00000422760 POLR2BP30876 1174 aaKnown RBP24.39■■□□□ 1.49
LSM8-203ENST00000422760 SEC24CP53992 1094 aa24.39■■□□□ 1.49
LSM8-203ENST00000422760 C1QBPQ07021 282 aaKnown RBP24.39■■□□□ 1.49
LSM8-203ENST00000422760 NOTUMQ6P988 496 aa24.39■■□□□ 1.49
LSM8-203ENST00000422760 CCDC134Q9H6E4 229 aa24.39■■□□□ 1.49
LSM8-203ENST00000422760 SMYD3Q9H7B4 428 aa24.39■■□□□ 1.49
LSM8-203ENST00000422760 MYADML2A6NDP7 307 aa24.38■■□□□ 1.49
LSM8-203ENST00000422760 LSM8O95777 96 aaKnown RBP24.38■■□□□ 1.49
LSM8-203ENST00000422760 ATP5DP30049 168 aa24.38■■□□□ 1.49
LSM8-203ENST00000422760 ATICP31939 592 aa24.38■■□□□ 1.49
LSM8-203ENST00000422760 PCBP1Q15365 356 aaKnown RBP eCLIP24.38■■□□□ 1.49
LSM8-203ENST00000422760 GKAP1Q5VSY0 366 aaPredicted RBP24.38■■□□□ 1.49
LSM8-203ENST00000422760 APBB1IPQ7Z5R6 666 aaPredicted RBP24.38■■□□□ 1.49
LSM8-203ENST00000422760 PACS2Q86VP3 889 aa24.38■■□□□ 1.49
LSM8-203ENST00000422760 NT5DC4Q86YG4 428 aa24.38■■□□□ 1.49
LSM8-203ENST00000422760 BBOF1Q8ND07 529 aa24.38■■□□□ 1.49
LSM8-203ENST00000422760 TMEM40Q8WWA1 233 aa24.38■■□□□ 1.49
LSM8-203ENST00000422760 TFAP2BQ92481 460 aa24.38■■□□□ 1.49
LSM8-203ENST00000422760 RAPGEF5Q92565 580 aa24.38■■□□□ 1.49
LSM8-203ENST00000422760 FAXDC2Q96IV6 333 aa24.38■■□□□ 1.49
LSM8-203ENST00000422760 EIF2AQ9BY44 585 aaKnown RBP24.38■■□□□ 1.49
LSM8-203ENST00000422760 SDCBP2Q9H190 292 aa24.38■■□□□ 1.49
LSM8-203ENST00000422760 VRTNQ9H8Y1 702 aa24.38■■□□□ 1.49
LSM8-203ENST00000422760 ITGA11Q9UKX5 1188 aa24.38■■□□□ 1.49
LSM8-203ENST00000422760 GAS8O95995 478 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 EIF4BP23588 611 aaKnown RBP24.37■■□□□ 1.49
LSM8-203ENST00000422760 LIG3P49916 1009 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 FCGRTP55899 365 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 TNFAIP8L3Q5GJ75 292 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 AADACL2Q6P093 401 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 SUGP1Q8IWZ8 645 aaKnown RBP24.37■■□□□ 1.49
LSM8-203ENST00000422760 CACNA2D3Q8IZS8 1091 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 RNF25Q96BH1 459 aaPredicted RBP24.37■■□□□ 1.49
LSM8-203ENST00000422760 KIF12Q96FN5 646 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 XPO6Q96QU8 1125 aaKnown RBP24.37■■□□□ 1.49
LSM8-203ENST00000422760 RABEP2Q9H5N1 569 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 MRPL47Q9HD33 250 aaKnown RBP24.37■■□□□ 1.49
LSM8-203ENST00000422760 C17orf102A2RUQ5 167 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 PSTPIP1O43586 416 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 CAND2O75155 1236 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 DUSP11O75319 330 aaKnown RBP24.37■■□□□ 1.49
LSM8-203ENST00000422760 C6orf222P0C671 652 aaPredicted RBP24.37■■□□□ 1.49
LSM8-203ENST00000422760 CYBAP13498 195 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 MMP8P22894 467 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 HOXC8P31273 242 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 PSMC4P43686 418 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 CDH8P55286 799 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 LACTBP83111 547 aaPredicted RBP24.37■■□□□ 1.49
LSM8-203ENST00000422760 SNX17Q15036 470 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 PPP1R7Q15435 360 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 SGO2Q562F6 1265 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 PAXIP1Q6ZW49 1069 aaPredicted RBP24.37■■□□□ 1.49
LSM8-203ENST00000422760 CNPY4Q8N129 248 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 TRIB2Q92519 343 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 CHMP6Q96FZ7 201 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 DPP3Q9NY33 737 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 SNTG2Q9NY99 539 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 AGAP1Q9UPQ3 857 aa24.37■■□□□ 1.49
LSM8-203ENST00000422760 RIPK2O43353 540 aa24.36■■□□□ 1.49
LSM8-203ENST00000422760 PTK6Q13882 451 aa24.36■■□□□ 1.49
LSM8-203ENST00000422760 SLC29A2Q14542 456 aa24.36■■□□□ 1.49
LSM8-203ENST00000422760 PLEKHA7Q6IQ23 1121 aa24.36■■□□□ 1.49
LSM8-203ENST00000422760 CCDC121Q6ZUS5 278 aa24.36■■□□□ 1.49
LSM8-203ENST00000422760 ZDHHC14Q8IZN3 488 aa24.36■■□□□ 1.49
LSM8-203ENST00000422760 C7orf31Q8N865 590 aa24.36■■□□□ 1.49
LSM8-203ENST00000422760 HPDLQ96IR7 371 aa24.36■■□□□ 1.49
LSM8-203ENST00000422760 FOXP3Q9BZS1 431 aa24.36■■□□□ 1.49
LSM8-203ENST00000422760 CXCL16Q9H2A7 254 aa24.36■■□□□ 1.49
LSM8-203ENST00000422760 PCDHGC3Q9UN70 934 aa24.36■■□□□ 1.49
LSM8-203ENST00000422760 GABRQQ9UN88 632 aa24.36■■□□□ 1.49
LSM8-203ENST00000422760 PDCD11Q14690 1871 aaKnown RBP24.36■■□□□ 1.49
LSM8-203ENST00000422760 SCN10AQ9Y5Y9 1956 aa24.36■■□□□ 1.49
LSM8-203ENST00000422760 MAMLD1Q13495 774 aa24.35■■□□□ 1.49
LSM8-203ENST00000422760 HHIPL1Q96JK4 782 aa24.35■■□□□ 1.49
LSM8-203ENST00000422760 SNX27Q96L92 541 aa24.35■■□□□ 1.49
LSM8-203ENST00000422760 HES2Q9Y543 173 aa24.35■■□□□ 1.49
LSM8-203ENST00000422760 SCINQ9Y6U3 715 aa24.35■■□□□ 1.49
LSM8-203ENST00000422760 GOLGA6L7A0A1B0GV03 622 aa24.35■■□□□ 1.49
LSM8-203ENST00000422760 ANKRD65E5RJM6 399 aa24.35■■□□□ 1.49
LSM8-203ENST00000422760 TMEM35BQ8NCS4 154 aa24.35■■□□□ 1.49
LSM8-203ENST00000422760 SNF8Q96H20 258 aa24.35■■□□□ 1.49
LSM8-203ENST00000422760 CABS1Q96KC9 395 aa24.35■■□□□ 1.49
LSM8-203ENST00000422760 PLEKHA5Q9HAU0 1116 aa24.35■■□□□ 1.49
LSM8-203ENST00000422760 HMGXB4Q9UGU5 601 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms