RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 ACTL9Q8TC94 416 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 TTC25Q96NG3 672 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 AGTPBP1Q9UPW5 1226 aa16.63■□□□□ 0.25
CDH1-202ENST00000422392 TCRBV7S3A2A0A539 114 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 ALOX15BO15296 676 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 PRPF4O43172 522 aaKnown RBP eCLIP16.62■□□□□ 0.25
CDH1-202ENST00000422392 SRGAP2CP0DJJ0 459 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 RAP1GAPP47736 663 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 CTCFP49711 727 aaPredicted RBP16.62■□□□□ 0.25
CDH1-202ENST00000422392 CLNS1AP54105 237 aaKnown RBP16.62■□□□□ 0.25
CDH1-202ENST00000422392 MCL1Q07820 350 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 MOGSQ13724 837 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 HIF1AQ16665 826 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 CCDC142Q17RM4 750 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 PPP1R15BQ5SWA1 713 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 LVRNQ6Q4G3 990 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 CENPUQ71F23 418 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 KIAA0319LQ8IZA0 1049 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 SCYL3Q8IZE3 742 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 ARFGAP1Q8N6T3 406 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 TMEM35BQ8NCS4 154 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 CCHCR1Q8TD31 782 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 LRRC8CQ8TDW0 803 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 FBF1Q8TES7 1133 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 GRAMD1AQ96CP6 724 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 PCYT2Q99447 389 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 TEX13BQ9BXU2 312 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 C15orf41Q9Y2V0 281 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 STARD13Q9Y3M8 1113 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 CST8O60676 142 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 TFAMQ00059 246 aaKnown RBP16.62■□□□□ 0.25
CDH1-202ENST00000422392 EEPD1Q7L9B9 569 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 TDRPQ86YL5 185 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 RHPN2Q8IUC4 686 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 BRSK2Q8IWQ3 736 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 PRPF31Q8WWY3 499 aaKnown RBP16.62■□□□□ 0.25
CDH1-202ENST00000422392 WDR83Q9BRX9 315 aaKnown RBP16.62■□□□□ 0.25
CDH1-202ENST00000422392 FOXP3Q9BZS1 431 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 CYTH4Q9UIA0 394 aa16.62■□□□□ 0.25
CDH1-202ENST00000422392 DRG1Q9Y295 367 aaKnown RBP16.62■□□□□ 0.25
CDH1-202ENST00000422392 C3orf70A6NLC5 250 aaPredicted RBP16.61■□□□□ 0.25
CDH1-202ENST00000422392 TYROBPO43914 113 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 FAM189A1O60320 539 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 CBX6O95503 412 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 ITGAVP06756 1048 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 PSMA2P25787 234 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 MARK3P27448 753 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 TAF5Q15542 800 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 PDK4Q16654 411 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 DENND1BQ6P3S1 775 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 LRRC37BQ96QE4 947 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 PCDH9Q9HC56 1237 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 ALG13Q9NP73 1137 aaKnown RBP16.61■□□□□ 0.25
CDH1-202ENST00000422392 STK32BQ9NY57 414 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 PSMC3IPQ9P2W1 217 aaPredicted RBP16.61■□□□□ 0.25
CDH1-202ENST00000422392 NXF1Q9UBU9 619 aaKnown RBP16.61■□□□□ 0.25
CDH1-202ENST00000422392 POLIQ9UNA4 740 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 MAGEB2O15479 319 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 ADCY3O60266 1144 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 EDF1O60869 148 aaKnown RBP16.61■□□□□ 0.25
CDH1-202ENST00000422392 ADRA1DP25100 572 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 NR1H3Q13133 447 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 PTPN20Q4JDL3 420 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 HHATQ5VTY9 493 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 MICALL2Q8IY33 904 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 SLC35B2Q8TB61 432 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 KCNV2Q8TDN2 545 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 JDP2Q8WYK2 163 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 CPT1BQ92523 772 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 NKD2Q969F2 451 aaPredicted RBP16.61■□□□□ 0.25
CDH1-202ENST00000422392 UBN1Q9NPG3 1134 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 PICK1Q9NRD5 415 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 PCSK1NQ9UHG2 260 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 RABGEF1Q9UJ41 708 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 ADAMTS5Q9UNA0 930 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 FARP1Q9Y4F1 1045 aaPredicted RBP16.61■□□□□ 0.25
CDH1-202ENST00000422392 NUMBLQ9Y6R0 609 aa16.61■□□□□ 0.25
CDH1-202ENST00000422392 TNS1Q9HBL0 1735 aaKnown RBP16.6■□□□□ 0.25
CDH1-202ENST00000422392 CD19P15391 556 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 PIGHQ14442 188 aaPredicted RBP16.6■□□□□ 0.25
CDH1-202ENST00000422392 SETDB1Q15047 1291 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 STXBP2Q15833 593 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 MAPK6Q16659 721 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 LRRC38Q5VT99 294 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 LRRC71Q8N4P6 559 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 CEP120Q8N960 986 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 PYROXD1Q8WU10 500 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 NIF3L1Q9GZT8 377 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 NOP53Q9NZM5 478 aaKnown RBP16.6■□□□□ 0.25
CDH1-202ENST00000422392 SHOC2Q9UQ13 582 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 USH1CQ9Y6N9 552 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 EVPLQ92817 2033 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 LRCH4O75427 683 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 ATG7O95352 703 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 GJB1P08034 283 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 UBA1P22314 1058 aaKnown RBP16.6■□□□□ 0.25
CDH1-202ENST00000422392 ABCD1P33897 745 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 YARSP54577 528 aaKnown RBP16.6■□□□□ 0.25
CDH1-202ENST00000422392 LACTBP83111 547 aaPredicted RBP16.6■□□□□ 0.25
CDH1-202ENST00000422392 SLC25A11Q02978 314 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms