RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 OSMP13725 252 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 PDIA3P30101 505 aaKnown RBP6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 GUCY1A2P33402 732 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 ADCY8P40145 1251 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 MLLT6P55198 1093 aaPredicted RBP6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 PRKG1Q13976 671 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 SPIDRQ14159 915 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 ME3Q16798 604 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 SHROOM1Q2M3G4 852 aaPredicted RBP6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 TMEM240Q5SV17 173 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 GRAMD4Q6IC98 578 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 CNKSR3Q6P9H4 555 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 TRMT10BQ6PF06 316 aaKnown RBP6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 APOA5Q6Q788 366 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 SYNE3Q6ZMZ3 975 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 BMP8AQ7Z5Y6 402 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 CDYL2Q8N8U2 506 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 OR14C36Q8NHC7 312 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 JPH3Q8WXH2 748 aaPredicted RBP6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 TMX3Q96JJ7 454 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 HIST1H2AHQ96KK5 128 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 TEKT5Q96M29 485 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 PWWP2AQ96N64 755 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 HIST1H2AJQ99878 128 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 TMEM47Q9BQJ4 181 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 RHOBTB2Q9BYZ6 727 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 KAT14Q9H8E8 782 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 NYAP2Q9P242 653 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 CLIP2Q9UDT6 1046 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 ZBTB21Q9ULJ3 1066 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 NAP1L2Q9ULW6 460 aaPredicted RBP6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 STX8Q9UNK0 236 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 FZD1Q9UP38 647 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 PCDHB6Q9Y5E3 794 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 SSC5DA1L4H1 1573 aa6.73□□□□□ -1.33
NIFKP3-201ENST00000417799 ZBTB43O43298 467 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 CUTAO60888 179 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 RFPL1O75677 317 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 LARGE1O95461 756 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 COL6A1P12109 1028 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 EEF2P13639 858 aaKnown RBP6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 PI3P19957 117 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 GPR15P49685 360 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 SLC5A3P53794 718 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 RCAN1P53805 252 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 CDK17Q00537 523 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 ICA1Q05084 483 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 TROAPQ12815 778 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 STK3Q13188 491 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 SSPNQ14714 243 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 DGKDQ16760 1214 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 MUM1Q2TAK8 710 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 PRR31Q5SQ13 230 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 ATG14Q6ZNE5 492 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 OTOP2Q7RTS6 562 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 ARMC9Q7Z3E5 817 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 CATIPQ7Z7H3 387 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 SIAH1Q8IUQ4 282 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 SLC41A1Q8IVJ1 513 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 WDR75Q8IWA0 830 aaKnown RBP6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 CMTR2Q8IYT2 770 aaKnown RBP6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 SCYL3Q8IZE3 742 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 OR5AN1Q8NGI8 311 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 GAB3Q8WWW8 586 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 ZKSCAN4Q969J2 545 aaPredicted RBP6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 SLC2A13Q96QE2 648 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 IFT122Q9HBG6 1241 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 SPATA6Q9NWH7 488 aaPredicted RBP6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 FBXO10Q9UK96 956 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 CNOT6Q9ULM6 557 aaKnown RBP6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 SYNPO2Q9UMS6 1093 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 ANKRD6Q9Y2G4 727 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 GIT1Q9Y2X7 761 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 CDY2AQ9Y6F7 541 aa6.72□□□□□ -1.33
NIFKP3-201ENST00000417799 A0A0G2JNJ9 132 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 TCAF2A6NFQ2 919 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 CELF2O95319 508 aaKnown RBP6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 CELA3BP08861 270 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 CALM1P0DP23 149 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 CALM2P0DP24 149 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 CALM3P0DP25 149 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 PF4V1P10720 104 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 YY1P25490 414 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 TXKP42681 527 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 METAP2P50579 478 aaKnown RBP eCLIP6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 FKBP1BP68106 108 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 CCT2P78371 535 aaKnown RBP6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 CUL4AQ13619 759 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 VGLL4Q14135 290 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 PPP2R5BQ15173 497 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 TMEM200BQ69YZ2 307 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 MOB2Q70IA6 237 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 MICU3Q86XE3 530 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 RAB11FIP4Q86YS3 637 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 NECAB1Q8N987 351 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 FANCBQ8NB91 859 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 NUP133Q8WUM0 1156 aa6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 ZCCHC14Q8WYQ9 949 aaKnown RBP6.71□□□□□ -1.34
NIFKP3-201ENST00000417799 GTF3C6Q969F1 213 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms