RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 QRICH2Q9H0J4 1663 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 AP1G2O75843 785 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 SPP2Q13103 211 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 PAK5Q9P286 719 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 TMA7Q9Y2S6 64 aaKnown RBP12.54□□□□□ -0.4
UBR4-205ENST00000417040 ARHGEF37A1IGU5 675 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 SAC3D1A6NKF1 404 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 RIBC1Q8N443 379 aaPredicted RBP12.54□□□□□ -0.4
UBR4-205ENST00000417040 POP1Q99575 1024 aaKnown RBP12.54□□□□□ -0.4
UBR4-205ENST00000417040 KCTD10Q9H3F6 313 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 BLOC1S6Q9UL45 172 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 PNMA8BQ9ULN7 279 aaPredicted RBP12.54□□□□□ -0.4
UBR4-205ENST00000417040 PNPLA7Q6ZV29 1317 aa12.54□□□□□ -0.4
UBR4-205ENST00000417040 STRNO43815 780 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 CLPTM1O96005 669 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 KAT2BQ92831 832 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 DCUN1D5Q9BTE7 237 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 RUSC1Q9BVN2 902 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 JPH1Q9HDC5 661 aaPredicted RBP12.53□□□□□ -0.4
UBR4-205ENST00000417040 CDY2AQ9Y6F7 541 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 CDY1Q9Y6F8 540 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 USP42Q9H9J4 1324 aaKnown RBP12.53□□□□□ -0.4
UBR4-205ENST00000417040 FOXP2O15409 715 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 EPHB2P29323 1055 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 RUNX1T1Q06455 604 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 PDPK2PQ6A1A2 396 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 ACAD10Q6JQN1 1059 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 ZNF467Q7Z7K2 595 aaPredicted RBP12.53□□□□□ -0.4
UBR4-205ENST00000417040 C11orf96Q7Z7L8 435 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 OR8H2Q8N162 312 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 TMEM121Q9BTD3 319 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 FOXN3O00409 490 aaPredicted RBP12.53□□□□□ -0.4
UBR4-205ENST00000417040 NDUFS3O75489 264 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 GPD1P21695 349 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 BMPR2Q13873 1038 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 OTOAQ7RTW8 1153 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 ASAP3Q8TDY4 903 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 MMP19Q99542 508 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 TMEM79Q9BSE2 394 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 TRIM54Q9BYV2 358 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 SEMA6BQ9H3T3 888 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 GPATCH2LQ9NWQ4 482 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 RBP3P10745 1247 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 ITGA4P13612 1032 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 EIF2B2P49770 351 aaKnown RBP12.53□□□□□ -0.4
UBR4-205ENST00000417040 HSD17B4P51659 736 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 MAPK11Q15759 364 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 DCAF6Q58WW2 860 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 RXFP1Q9HBX9 757 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 TRPC7Q9HCX4 862 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 DAPK2Q9UIK4 370 aa12.53□□□□□ -0.4
UBR4-205ENST00000417040 PAPD7Q5XG87 772 aaKnown RBP12.52□□□□□ -0.4
UBR4-205ENST00000417040 CIAPIN1Q6FI81 312 aa12.52□□□□□ -0.4
UBR4-205ENST00000417040 STX19Q8N4C7 294 aa12.52□□□□□ -0.4
UBR4-205ENST00000417040 MYLK2Q9H1R3 596 aa12.52□□□□□ -0.4
UBR4-205ENST00000417040 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.52□□□□□ -0.4
UBR4-205ENST00000417040 CPB1P15086 417 aa12.52□□□□□ -0.4
UBR4-205ENST00000417040 PSMA4P25789 261 aaKnown RBP12.52□□□□□ -0.4
UBR4-205ENST00000417040 IFI35P80217 286 aaPredicted RBP12.52□□□□□ -0.4
UBR4-205ENST00000417040 GTF2H3Q13889 308 aa12.52□□□□□ -0.4
UBR4-205ENST00000417040 EML3Q32P44 896 aa12.52□□□□□ -0.4
UBR4-205ENST00000417040 GDPD5Q8WTR4 605 aa12.52□□□□□ -0.4
UBR4-205ENST00000417040 SEMA4DQ92854 862 aa12.52□□□□□ -0.4
UBR4-205ENST00000417040 TAGLN3Q9UI15 199 aa12.52□□□□□ -0.4
UBR4-205ENST00000417040 CDC42BPGQ6DT37 1551 aa12.52□□□□□ -0.4
UBR4-205ENST00000417040 ZNF263O14978 683 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 MAPRE1Q15691 268 aaKnown RBP12.52□□□□□ -0.41
UBR4-205ENST00000417040 P3H2Q8IVL5 708 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 SLC20A1Q8WUM9 679 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 SCFD1Q8WVM8 642 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 ECSITQ9BQ95 431 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 THUMPD3Q9BV44 507 aaKnown RBP12.52□□□□□ -0.41
UBR4-205ENST00000417040 SEMA4AQ9H3S1 761 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 MCM8Q9UJA3 840 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 NAGPAQ9UK23 515 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 RAP1GAPP47736 663 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 ARHGAP17Q68EM7 881 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 APPL2Q8NEU8 664 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 NEDD1Q8NHV4 660 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 CATSPER2Q96P56 530 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 FUCA2Q9BTY2 467 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 CYLDQ9NQC7 956 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 PIN4Q9Y237 131 aaKnown RBP12.52□□□□□ -0.41
UBR4-205ENST00000417040 COL15A1P39059 1388 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 NR5A2O00482 541 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 MT-CO1P00395 513 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 ATP6V1B2P21281 511 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 GRK2P25098 689 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 PTPAQ15257 358 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 SNX30Q5VWJ9 437 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 FBXO25Q8TCJ0 367 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 ERGIC2Q96RQ1 377 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 PAFAH2Q99487 392 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 PIH1D1Q9NWS0 290 aaKnown RBP12.52□□□□□ -0.41
UBR4-205ENST00000417040 ZNF446Q9NWS9 450 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 IL1RAPL1Q9NZN1 696 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 TJP2Q9UDY2 1190 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
UBR4-205ENST00000417040 TMEM94Q12767 1356 aa12.52□□□□□ -0.41
UBR4-205ENST00000417040 CALB2P22676 271 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms